RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PRSS57Q6UWY2 283 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 CLIP4Q8N3C7 705 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 TEX45Q8NA69 505 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 THAP4Q8WY91 577 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 RUBCNQ92622 972 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 ATOH1Q92858 354 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-229ENST00000621897 LTV1Q96GA3 475 aaPredicted RBP4.67□□□□□ -1.66
BRCA1-229ENST00000621897 TM6SF1Q9BZW5 370 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 CTDSP1Q9GZU7 261 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 TWSG1Q9GZX9 223 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 GRHL1Q9NZI5 618 aa4.67□□□□□ -1.66
BRCA1-229ENST00000621897 OR6C68A6NDL8 312 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 SEPT4O43236 478 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 STRNO43815 780 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 METTL18O95568 372 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 ENO3P13929 434 aaPredicted RBP4.66□□□□□ -1.66
BRCA1-229ENST00000621897 ADD2P35612 726 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 SKIV2L2P42285 1042 aaKnown RBP4.66□□□□□ -1.66
BRCA1-229ENST00000621897 AMTP48728 403 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 CLCN5P51795 746 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 NUDT6P53370 316 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 BNC1Q01954 994 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 MYBPC2Q14324 1141 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 FBXO43Q4G163 708 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.66□□□□□ -1.66
BRCA1-229ENST00000621897 ARMC9Q7Z3E5 817 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 FJX1Q86VR8 437 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 TICAM2Q86XR7 235 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 PALB2Q86YC2 1186 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 MYCT1Q8N699 235 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 SETD9Q8NE22 299 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 TMEM163Q8TC26 289 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 GPT2Q8TD30 523 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 TMEM18Q96B42 140 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 GFM1Q96RP9 751 aaKnown RBP4.66□□□□□ -1.66
BRCA1-229ENST00000621897 NPFFR1Q9GZQ6 430 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 SAYSD1Q9NPB0 183 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 DHDHQ9UQ10 334 aa4.66□□□□□ -1.66
BRCA1-229ENST00000621897 SRPRBQ9Y5M8 271 aaKnown RBP4.66□□□□□ -1.66
BRCA1-229ENST00000621897 SCN5AQ14524 2016 aa4.65□□□□□ -1.66
BRCA1-229ENST00000621897 B9A039 149 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 STX16-NPEPL1H3BU86 382 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 STX16O14662 325 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 ZBTB11O95625 1053 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-229ENST00000621897 NAGAP17050 411 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 GJC1P36383 396 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 MCM2P49736 904 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 ART1P52961 327 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 RRP1P56182 461 aaKnown RBP4.65□□□□□ -1.67
BRCA1-229ENST00000621897 RHBDL3P58872 404 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 KIF5AQ12840 1032 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 PLCB4Q15147 1175 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 RPE65Q16518 533 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 IZUMO4Q1ZYL8 232 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 MON1BQ7L1V2 547 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 RBFAQ8N0V3 343 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 GALNT15Q8N3T1 639 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 OR4N2Q8NGD1 307 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 OR14A16Q8NHC5 309 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 TMED6Q8WW62 240 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 RBM17Q96I25 401 aaKnown RBP4.65□□□□□ -1.67
BRCA1-229ENST00000621897 C6orf106Q9H6K1 298 aaPredicted RBP4.65□□□□□ -1.67
BRCA1-229ENST00000621897 IL36RNQ9UBH0 155 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 RIPOR2Q9Y4F9 1068 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 PCDHGB1Q9Y5G3 927 aa4.65□□□□□ -1.67
BRCA1-229ENST00000621897 IGHV4-28A0A0C4DH34 117 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 EYA2O00167 538 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 ASAP2O43150 1006 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 TK1P04183 234 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 MMP3P08254 477 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 FCGR1AP12314 374 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 YWHAQP27348 245 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 AARSP49588 968 aaKnown RBP eCLIP4.64□□□□□ -1.67
BRCA1-229ENST00000621897 CTTNQ14247 550 aaKnown RBP4.64□□□□□ -1.67
BRCA1-229ENST00000621897 ME3Q16798 604 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 C9orf57Q5W0N0 161 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 NAPEPLDQ6IQ20 393 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 C16orf82Q7Z2V1 217 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 MOGAT3Q86VF5 341 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 SUGP1Q8IWZ8 645 aaKnown RBP4.64□□□□□ -1.67
BRCA1-229ENST00000621897 AFG1LQ8WV93 481 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 TRAPPC12Q8WVT3 735 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 NCSTNQ92542 709 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 RNFT2Q96EX2 444 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 MASTLQ96GX5 879 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 CDT1Q9H211 546 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 MVB12BQ9H7P6 319 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 WDR6Q9NNW5 1121 aaKnown RBP4.64□□□□□ -1.67
BRCA1-229ENST00000621897 OCIAD1Q9NX40 245 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 KIF17Q9P2E2 1029 aa4.64□□□□□ -1.67
BRCA1-229ENST00000621897 FAM157AC9JC47 383 aa4.63□□□□□ -1.67
BRCA1-229ENST00000621897 CKMT1AP12532 417 aa4.63□□□□□ -1.67
BRCA1-229ENST00000621897 DCTDP32321 178 aa4.63□□□□□ -1.67
BRCA1-229ENST00000621897 TRAPPC10P48553 1259 aa4.63□□□□□ -1.67
BRCA1-229ENST00000621897 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-229ENST00000621897 GRSF1Q12849 480 aaKnown RBP eCLIP4.63□□□□□ -1.67
BRCA1-229ENST00000621897 PRKG1Q13976 671 aa4.63□□□□□ -1.67
BRCA1-229ENST00000621897 KRT72Q14CN4 511 aa4.63□□□□□ -1.67
BRCA1-229ENST00000621897 C10orf62Q5T681 223 aaPredicted RBP4.63□□□□□ -1.67
BRCA1-229ENST00000621897 GJB7Q6PEY0 223 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms