RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 FUT11Q495W5 492 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 DENND4CQ5VZ89 1909 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ITPRIPL1Q6GPH6 555 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 WDR93Q6P2C0 686 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 LINGO4Q6UY18 593 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 CCNI2Q6ZMN8 369 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 METTL3Q86U44 580 aaKnown RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ADHFE1Q8IWW8 467 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 PHTF2Q8N3S3 785 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 EIF1ADQ8N9N8 165 aaKnown RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 IFT81Q8WYA0 676 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 DNASE1L2Q92874 299 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 CHFRQ96EP1 664 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 SNF8Q96H20 258 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 PSKH2Q96QS6 385 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 FCRL5Q96RD9 977 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 CEP41Q9BYV8 373 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 TRIM31Q9BZY9 425 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 SLC25A51Q9H1U9 297 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 DPH5Q9H2P9 285 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 C8orf33Q9H7E9 229 aaPredicted RBP8.16□□□□□ -1.1
CPNE3-209ENST00000620393 NT5MQ9NPB1 228 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 RAB6BQ9NRW1 208 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 HAUS2Q9NVX0 235 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ELOVL2Q9NXB9 296 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ANAPC5Q9UJX4 755 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 RAB21Q9UL25 225 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 HS3ST2Q9Y278 367 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 ACTL7AQ9Y615 435 aa8.16□□□□□ -1.1
CPNE3-209ENST00000620393 BRWD1Q9NSI6 2320 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ESYT3A0FGR9 886 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 TBC1D3BA6NDS4 549 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 PRRT4C9JH25 899 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 K7ERQ8 282 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SMAPO00193 183 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 MUSKO15146 869 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 TP73O15350 636 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 PSMD3O43242 534 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SMAD6O43541 496 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 TMCC1O94876 653 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SEC31AO94979 1220 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ASLP04424 464 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 APODP05090 189 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 HLA-DQB2P05538 268 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SRPRAP08240 638 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 DLDP09622 509 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 NFKB1P19838 968 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 CR2P20023 1033 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 MCM3P25205 808 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 MAGEA6P43360 314 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 TNFRSF4P43489 277 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 CARSP49589 748 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SERPINH1P50454 418 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ITGA8P53708 1063 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 PLTPP55058 493 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 CAV1Q03135 178 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ITKQ08881 620 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 NIPAL4Q0D2K0 466 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 MESP2Q0VG99 397 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 CALCOCO2Q13137 446 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SEMA5AQ13591 1074 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 PRPSAP1Q14558 356 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ZNF235Q14590 738 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 MORF4L2Q15014 288 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 EIF4HQ15056 248 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ELF2Q15723 593 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 DGKKQ5KSL6 1271 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 RNASEH2BQ5TBB1 312 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 HIBCHQ6NVY1 386 aaPredicted RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 NUDT18Q6ZVK8 323 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 RALGPS2Q86X27 583 aaPredicted RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SUGP1Q8IWZ8 645 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 KLHDC8BQ8IXV7 354 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 PGBD5Q8N414 524 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 NAT8LQ8N9F0 302 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 TERB1Q8NA31 727 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ATP11CQ8NB49 1132 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 KDM1BQ8NB78 822 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 TSEN2Q8NCE0 465 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ARRDC2Q8TBH0 407 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 CPT1BQ92523 772 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ART4Q93070 314 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ISG20Q96AZ6 181 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ZNF419Q96HQ0 510 aaPredicted RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 MRGPRX3Q96LB0 322 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 PPP1R2P1Q96PQ5 205 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 MGME1Q9BQP7 344 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 CINPQ9BW66 212 aaPredicted RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 FAM129AQ9BZQ8 928 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 GBA3Q9H227 469 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 FBRSL1Q9HCM7 1045 aaKnown RBP8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SLC2A4RGQ9NR83 387 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 GRHL1Q9NZI5 618 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 THEGQ9P2T0 379 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 RSPH14Q9UHP6 348 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SLCO3A1Q9UIG8 710 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 SLC25A13Q9UJS0 675 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 PLA2G4CQ9UP65 541 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 ERVW-1Q9UQF0 538 aa8.15□□□□□ -1.1
CPNE3-209ENST00000620393 AAR2Q9Y312 384 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms