RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 SAMD11Q96NU1 681 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 KLHL1Q9NR64 748 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CDH7Q9ULB5 785 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 BCLAF3A2AJT9 711 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 TCN1P20061 433 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 RORCP51449 518 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TAGLNQ01995 201 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 TRIP10Q15642 601 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAM122CQ6P4D5 195 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 CFAP206Q8IYR0 622 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PCDH20Q8N6Y1 951 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 C12orf29Q8N999 325 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 KDM1BQ8NB78 822 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAM149B1Q96BN6 582 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ARMC5Q96C12 935 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RNFT2Q96EX2 444 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 RASSF1Q9NS23 344 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 KLK14Q9P0G3 267 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 TBX20Q9UMR3 447 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 ABCG2Q9UNQ0 655 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FAM95CA0A1B0GW59 222 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 FYNP06241 537 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MADCAM1Q13477 382 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PDK1Q15118 436 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 HIST2H2ACQ16777 129 aaPredicted RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 HIST2H2AA3Q6FI13 130 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 USP43Q70EL4 1123 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PHTF2Q8N3S3 785 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 PHB2Q99623 299 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MAP10Q9P2G4 905 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 EIF3LQ9Y262 564 aaKnown RBP3.12□□□□□ -1.91
NEB-220ENST00000618972 ALG5Q9Y673 324 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SPATA31A5Q5VU36 1347 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 SPATA31A7Q8IWB4 1347 aa3.12□□□□□ -1.91
NEB-220ENST00000618972 MPP1Q00013 466 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 NCOA4Q13772 614 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CLEC16AQ2KHT3 1053 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PYHIN1Q6K0P9 492 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PMF1Q6P1K2 205 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 KCTD4Q8WVF5 259 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DPF3Q92784 378 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CCDC163A0A0D9SF12 145 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DENND3A2RUS2 1198 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TLL1O43897 1013 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PSMG1O95456 288 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TTLL1O95922 423 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 C7P10643 843 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CRTC3Q6UUV7 619 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 LRRC74BQ6ZQY2 392 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 DHFR2Q86XF0 187 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 LSMEM2Q8N112 164 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 COPS5Q92905 334 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PLEKHA8Q96JA3 519 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC4A5Q9BY07 1137 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PADI4Q9UM07 663 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TDRKHQ9Y2W6 561 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 IL18RAPO95256 599 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PORP16435 677 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 ADRA1DP25100 572 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CYCSP99999 105 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC9A5Q14940 896 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 OCLNQ16625 522 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 ACSBG2Q5FVE4 666 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PRAMEF19Q5SWL8 479 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 EEF1DP3Q658K8 133 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 MCOLN2Q8IZK6 566 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 INO80EQ8NBZ0 244 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 MCOLN3Q8TDD5 553 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 LTB4R2Q9NPC1 389 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 TSR3Q9UJK0 312 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 BHMG1C9JSJ3 638 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 VNN1O95497 513 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 FAM163BP0C2L3 166 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CRKP46108 304 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CACHD1Q5VU97 1274 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 OR52E8Q6IFG1 317 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 BNC2Q6ZN30 1099 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 SLC26A11Q86WA9 606 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SEPT5Q99719 369 aaPredicted RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 C7orf50Q9BRJ6 194 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 EPB41L1Q9H4G0 881 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RHBDL2Q9NX52 303 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 HSPBP1Q9NZL4 362 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 B3GNT3Q9Y2A9 372 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 AMHP03971 560 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 EIF2DP41214 584 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 PABPC1LQ4VXU2 614 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 KLHL22Q53GT1 634 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 PCID2Q5JVF3 399 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 BROXQ5VW32 411 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 USP51Q70EK9 711 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 OTOP3Q7RTS5 596 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 LARGE2Q8N3Y3 721 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 RBM15BQ8NDT2 890 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 CYGBQ8WWM9 190 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 NYAP2Q9P242 653 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CNOT11Q9UKZ1 510 aaKnown RBP3.11□□□□□ -1.91
NEB-220ENST00000618972 HEATR9A2RTY3 570 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 CST8O60676 142 aa3.11□□□□□ -1.91
NEB-220ENST00000618972 SBK2P0C263 348 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms