RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	MCAM	P43121	646 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CDKN1B	P46527	198 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SLC11A1	P49279	550 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RHAG	Q02094	409 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DDX39B	Q13838	428 aa	Known RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	RASIP1	Q5U651	963 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FBXL19	Q6PCT2	694 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	BLOC1S2	Q6QNY1	142 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ISLR2	Q6UXK2	745 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TRPM8	Q7Z2W7	1104 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DSG4	Q86SJ6	1040 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZSWIM9	Q86XI8	627 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF679	Q8IYX0	411 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	AHI1	Q8N157	1196 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	STKLD1	Q8NE28	680 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PHKB	Q93100	1093 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	HSH2D	Q96JZ2	352 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CCDC17	Q96LX7	622 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GGNBP2	Q9H3C7	697 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TDRD3	Q9H7E2	651 aa	Known RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TIMMDC1	Q9NPL8	285 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	DDX28	Q9NUL7	540 aa	Known RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	FAM120C	Q9NX05	1096 aa	Known RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PKD2L2	Q9NZM6	624 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	SNX7	Q9UNH6	387 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ERVK-11	Q9UQG0	969 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	GPSM3	Q9Y4H4	160 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CCL27	Q9Y4X3	112 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PCDHGA8	Q9Y5G5	932 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PCDHGA7	Q9Y5G6	932 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PCDHGA6	Q9Y5G7	932 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	PCDHGA3	Q9Y5H0	932 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	CLCA3P	Q9Y6N3	262 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	ZNF521	Q96K83	1311 aa		4.15	□□□□□ -1.74
UBE2D3-233	ENST00000618836	TMEM120B	A0PK00	339 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	FPGT	O14772	594 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MATN3	O15232	486 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PPM1D	O15297	605 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	FKTN	O75072	461 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PSIP1	O75475	530 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ZNF821	O75541	412 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	HSMCR30	P0CW71	290 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CBR1	P16152	277 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SLC7A1	P30825	629 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	HOXA7	P31268	230 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NUDT1	P36639	197 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SPAM1	P38567	509 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	UBE2H	P62256	183 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	IFFO1	Q0D2I5	559 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CALCOCO2	Q13137	446 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	RRP1B	Q14684	758 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TBRG1	Q3YBR2	411 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	XKR4	Q5GH76	650 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	C10orf120	Q5SQS8	335 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PAOX	Q6QHF9	649 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SLC36A4	Q6YBV0	504 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	LIAT1	Q6ZQX7	453 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TAS2R42	Q7RTR8	314 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MIB1	Q86YT6	1006 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SLC25A41	Q8N5S1	370 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	OR8J2	Q8NGG1	315 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TOE1	Q96GM8	510 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MAGED4	Q96JG8	741 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NSMCE2	Q96MF7	247 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ZKSCAN3	Q9BRR0	538 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	AP5M1	Q9H0R1	490 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	DPEP3	Q9H4B8	488 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CERS4	Q9HA82	394 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	EPB41L5	Q9HCM4	733 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	VCX3A	Q9NNX9	186 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SAMSN1	Q9NSI8	373 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	RHBDL2	Q9NX52	303 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ELOVL2	Q9NXB9	296 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CYB5R1	Q9UHQ9	305 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ATP6V1H	Q9UI12	483 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	DNAI1	Q9UI46	699 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	GINS2	Q9Y248	185 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ACOT9	Q9Y305	439 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	NPFFR2	Q9Y5X5	522 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CPSF1	Q10570	1443 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	LRRC37A2	A6NM11	1700 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PVALEF	A0A1B0GWK0	134 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	MTMR11	A4FU01	709 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836		B4E1Z4	1266 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PRSS44	E7EML9	344 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	SH2B2	O14492	632 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	FBXO24	O75426	580 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CFB	P00751	764 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ASS1	P00966	412 aa	Known RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	INHA	P05111	366 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	TFPT	P0C1Z6	253 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ZNF865	P0CJ78	1059 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	GSTM2	P28161	218 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	CASP3	P42574	277 aa		4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	PIP4K2A	P48426	406 aa	Predicted RBP	4.15	□□□□□ -1.75
UBE2D3-233	ENST00000618836	ALDH7A1	P49419	539 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms