RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ARL2P36404 184 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 GPR17Q13304 367 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TRIP4Q15650 581 aaPredicted RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TMEM240Q5SV17 173 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 MAML1Q92585 1016 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 COPS8Q99627 209 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TBL1YQ9BQ87 522 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 SGIP1Q9BQI5 828 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 DHX33Q9H6R0 707 aaKnown RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 DNAJB4Q9UDY4 337 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TRIM33Q9UPN9 1127 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 NAALADL1Q9UQQ1 740 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 EIF3LQ9Y262 564 aaKnown RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 A8MUI8 341 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 RASA4BC9J798 803 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CASQ2O14958 399 aaPredicted RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 RASA4O43374 803 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 VEGFDO43915 354 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CCNG1P51959 295 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 SLC12A3P55017 1021 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CSHL1Q14406 222 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 EFTUD2Q15029 972 aaKnown RBP eCLIP11.05□□□□□ -0.649e-7■■■■□ 23.5
POLR2A-209ENST00000617998 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 NT5DC1Q5TFE4 455 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 SLC47A2Q86VL8 602 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TMEM156Q8N614 296 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 OSBPL6Q9BZF3 934 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 ALG6Q9Y672 507 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 A0A087WUV0 522 aaPredicted RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 LDB2O43679 373 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 SERPINI2O75830 405 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CBWD6Q4V339 395 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TRIM61Q5EBN2 209 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CARD16Q5EG05 197 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CEP76Q8TAP6 659 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 AGR3Q8TD06 166 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 RSRC1Q96IZ7 334 aaKnown RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CEP41Q9BYV8 373 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 KIAA0100Q14667 2235 aaKnown RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 LYPLA2O95372 231 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 AP2B1P63010 937 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 GCNT1Q02742 428 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 RASIP1Q5U651 963 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 IRGQQ8WZA9 623 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TOP1MTQ969P6 601 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 MKL2Q9ULH7 1088 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CHURC1-FNTBB4DL54 471 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 KIAA0355O15063 1070 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 MPOP05164 745 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 NTSP30990 170 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 COPZ1P61923 177 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 ZCCHC9Q8N567 271 aaKnown RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 FAIM2Q9BWQ8 316 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 FAM83DQ9H4H8 585 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 HEBP1Q9NRV9 189 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 H2AFY2Q9P0M6 372 aaPredicted RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 EVPLLA8MZ36 301 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 NPC1O15118 1278 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 INPP1P49441 399 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 CDH17Q12864 832 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 ICE2Q659A1 982 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 SLC29A3Q9BZD2 475 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 UPF3AQ9H1J1 476 aaKnown RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 R3HDMLQ9H3Y0 253 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 IARS2Q9NSE4 1012 aaKnown RBP11.05□□□□□ -0.64
POLR2A-209ENST00000617998 FLRT1Q9NZU1 646 aa11.05□□□□□ -0.64
POLR2A-209ENST00000617998 PTPRZ1P23471 2315 aaPredicted RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 KERAO60938 352 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 DAB1O75553 588 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 DCNP07585 359 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 PYGBP11216 843 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 HLA-EP13747 358 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SERPINH1P50454 418 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 AP5B1Q2VPB7 878 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 CENPPQ6IPU0 288 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 FMR1NBQ8N0W7 255 aaPredicted RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 PIP4K2CQ8TBX8 421 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 NUS1Q96E22 293 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 FAM118BQ9BPY3 351 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 ABHD10Q9NUJ1 306 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 TAS2R13Q9NYV9 303 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 ZKSCAN5Q9Y2L8 839 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 E2F8A0AVK6 867 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 MYBPHLA2RUH7 354 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 TISP43B9A030 160 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SEMA4FO95754 770 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 JUNDP17535 347 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 NDUFS1P28331 727 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 HNRNPH1P31943 449 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 FLT3P36888 993 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 PARP15Q460N3 678 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 TMEM145Q8NBT3 493 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 COG1Q8WTW3 980 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 TM9SF4Q92544 642 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 TMEM237Q96Q45 408 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms