RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 KCNK1O00180 336 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 AP3B1O00203 1094 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 DNAJA2O60884 412 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 DUSP11O75319 330 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 TADA2AO75478 443 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 CHRNGP07510 517 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 COL6A2P12110 1019 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 KCNE1P15382 129 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 NPR3P17342 541 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ERCC2P18074 760 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ADRA1BP35368 520 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 TAF6P49848 677 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 THOP1P52888 689 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 GALNT2Q10471 571 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 SLC5A9Q2M3M2 681 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 USP41Q3LFD5 358 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 SV2CQ496J9 727 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 HSP90AA5PQ58FG0 334 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 GLRA4Q5JXX5 417 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 RARS2Q5T160 578 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 OSTM1Q86WC4 334 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 APPL2Q8NEU8 664 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ADCY4Q8NFM4 1077 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 STYXQ8WUJ0 223 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 DPF3Q92784 378 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 MFSD3Q96ES6 412 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ATXN7L3BQ96GX2 97 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 PRICKLE1Q96MT3 831 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 PGLYRP2Q96PD5 576 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 VAT1Q99536 393 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 NXF3Q9H4D5 531 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 RHOJQ9H4E5 214 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 TUT1Q9H6E5 874 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 SHROOM3Q8TF72 1996 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 NRCAMQ92823 1304 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 TARM1B6A8C7 271 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ZBTB24O43167 697 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 USP12O75317 370 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 GPR32O75388 356 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 PIGNO95427 931 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 XRCC1P18887 633 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 SERPINB5P36952 375 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 POLD2P49005 469 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ZNF135P52742 658 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 BIRC2Q13490 618 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 CYLC2Q14093 348 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 GRM3Q14832 879 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 PDCD2Q16342 344 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 PPM1LQ5SGD2 360 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ZNF618Q5T7W0 954 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 CATSPER4Q7RTX7 472 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 NECAB2Q7Z6G3 386 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 TLK2Q86UE8 772 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ZC3HC1Q86WB0 502 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 CNTN4Q8IWV2 1026 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 AHI1Q8N157 1196 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 NPWQ8N729 165 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 CNTD1Q8N815 330 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 KLHDC9Q8NEP7 349 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ACVR1CQ8NER5 493 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 NDRG1Q92597 394 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 PGAP3Q96FM1 320 aaPredicted RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 GCNAQ96QF7 691 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 UPF3AQ9H1J1 476 aaKnown RBP13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ZNF696Q9H7X3 374 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 ZBTB26Q9HCK0 441 aa13.12□□□□□ -0.31
CLTCL1-210ENST00000617926 FAM72CH0Y354 149 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 TK2O00142 265 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 AIM2O14862 343 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 BCAS2O75934 225 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 CD1EP15812 388 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 RPL5P46777 297 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 GRIA4P48058 902 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 HSPA13P48723 471 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 TPI1P60174 286 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 ZBTB17Q13105 803 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 FLOT2Q14254 428 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 KIZQ2M2Z5 673 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 ARL13AQ5H913 290 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 SH2D4BQ5SQS7 431 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 CERCAMQ5T4B2 595 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 FAM72AQ5TYM5 149 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 SYPL2Q5VXT5 272 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 CCSAPQ6IQ19 270 aaPredicted RBP13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 FAM72DQ6L9T8 149 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 PAQR9Q6ZVX9 377 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 FAM72BQ86X60 149 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 LSMEM2Q8N112 164 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 DNAAF3Q8N9W5 541 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 RNF169Q8NCN4 708 aa13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 PDCD6IPQ8WUM4 868 aaKnown RBP13.11□□□□□ -0.31
CLTCL1-210ENST00000617926 MAELQ96JY0 434 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms