RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 DHDDSQ86SQ9 333 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RNF180Q86T96 592 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 OSTM1Q86WC4 334 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 DENND6AQ8IWF6 608 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SCAMP5Q8TAC9 235 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 AGAP2Q99490 1192 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MIPEPQ99797 713 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SMOQ99835 787 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MLPHQ9BV36 600 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 AGO3Q9H9G7 860 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 WDR41Q9HAD4 459 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAF1Q9UNN5 650 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM50BQ9Y247 325 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 GIT1Q9Y2X7 761 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 PCDHB12Q9Y5F1 795 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SIPA1L3O60292 1781 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MYH15Q9Y2K3 1946 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 COL4A1P02462 1669 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RGSL1A5PLK6 1076 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MANSC4A6NHS7 340 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZBTB42B2RXF5 422 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 PAGE1O75459 146 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 XPAP23025 273 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MSLNQ13421 630 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC39A12Q504Y0 691 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 OLFML2BQ68BL8 750 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZBTB49Q6ZSB9 765 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CNTD1Q8N815 330 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR52K2Q8NGK3 314 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF778Q96MU6 729 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CAAP1Q9H8G2 361 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 EML4Q9HC35 981 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 PNPLA8Q9NP80 782 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RGS18Q9NS28 235 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CBX4O00257 560 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 PIRO00625 290 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 FGF10O15520 208 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 DUSP11O75319 330 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 GLP2RO95838 553 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MPOP05164 745 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CKMP06732 381 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 LRPAP1P30533 357 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 GSCP56915 257 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MRPS6P82932 125 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RAD51Q06609 339 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 OLIG2Q13516 323 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ISLR2Q6UXK2 745 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SPDYE1Q8NFV5 336 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 GCNAQ96QF7 691 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZBTB18Q99592 522 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RBBP8Q99708 897 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRMOQ9BU70 441 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CRTAC1Q9NQ79 661 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 TBC1D13Q9NVG8 400 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 NDUFA13Q9P0J0 144 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 DOT1LQ8TEK3 1739 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MYO5AQ9Y4I1 1855 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 GNGT2O14610 69 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 IRAK2O43187 625 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 VPS26AO75436 327 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLPTM1O96005 669 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SPARCP09486 303 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 MPSTP25325 297 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RECQLP46063 649 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC11A2P49281 568 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 HARS2P49590 506 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 PRKAA2P54646 552 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 TAZQ16635 292 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 DDR2Q16832 855 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 RFWD3Q6PCD5 774 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ARRDC4Q8NCT1 418 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 UTP4Q969X6 686 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 TBATAQ96M53 351 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCDC138Q96M89 665 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ING2Q9H160 280 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 ATP13A1Q9HD20 1204 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 THEGQ9P2T0 379 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 NKX1-2Q9UD57 310 aaPredicted RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 TSR3Q9UJK0 312 aaKnown RBP5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 POMPQ9Y244 141 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 PCDHA11Q9Y5I1 949 aa5.71□□□□□ -1.5
SYNCRIP-204ENST00000616122 SCAMP3O14828 347 aaKnown RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 DNAJC6O75061 913 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 SOAT2O75908 522 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 WFS1O76024 890 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CSPG5O95196 566 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 S100BP04271 92 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RAG1P15918 1043 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RAB10P61026 200 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RALGPS1Q5JS13 557 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 CGB2Q6NT52 195 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF781Q8N8C0 355 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 KHSRPQ92945 711 aaKnown RBP eCLIP5.7□□□□□ -1.52e-7■■■■□ 24.5
SYNCRIP-204ENST00000616122 PBXIP1Q96AQ6 731 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 RTP4Q96DX8 246 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 PRR11Q96HE9 360 aaPredicted RBP5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 EXOC2Q96KP1 924 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 NDNQ99608 321 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 GPR63Q9BZJ6 419 aa5.7□□□□□ -1.5
SYNCRIP-204ENST00000616122 ALG9Q9H6U8 611 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms