RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 CCNHP51946 323 aaPredicted RBP23.17■■□□□ 1.3
FAM228B-208ENST00000613899 NEK3P51956 506 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 AIF1P55008 147 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 CARD16Q5EG05 197 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 CAVIN1Q6NZI2 390 aaKnown RBP23.17■■□□□ 1.3
FAM228B-208ENST00000613899 DCUN1D2Q6PH85 259 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 HORMAD1Q86X24 394 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 MCOLN2Q8IZK6 566 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 ZCCHC14Q8WYQ9 949 aaKnown RBP23.17■■□□□ 1.3
FAM228B-208ENST00000613899 CNPY3Q9BT09 278 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 PTPRBP23467 1997 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 ASPMQ8IZT6 3477 aa23.17■■□□□ 1.3
FAM228B-208ENST00000613899 A0A1W2PQU0 124 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 ITGB7P26010 798 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 L1CAMP32004 1257 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 ZNF165P49910 485 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 PPP1R15BQ5SWA1 713 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 PRAMEF14Q5SWL7 426 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 SCYL2Q6P3W7 929 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 IRF2BP2Q7Z5L9 587 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 GATAD2AQ86YP4 633 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 PLPP6Q8IY26 295 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 SAP25Q8TEE9 199 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 BAP1Q92560 729 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 VCPIP1Q96JH7 1222 aa23.16■■□□□ 1.3
FAM228B-208ENST00000613899 SPEGQ15772 3267 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 ZSCAN5CA6NGD5 496 aaPredicted RBP23.15■■□□□ 1.3
FAM228B-208ENST00000613899 GOLGA8CPA6NN73 597 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 CD160O95971 181 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 TNFAIP3P21580 790 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 EPHB2P29323 1055 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 RXRGP48443 463 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 RPL7AP62424 266 aaKnown RBP23.15■■□□□ 1.3
FAM228B-208ENST00000613899 POLD3Q15054 466 aaPredicted RBP23.15■■□□□ 1.3
FAM228B-208ENST00000613899 SHBQ15464 509 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 RTL3Q8N8U3 475 aaKnown RBP23.15■■□□□ 1.3
FAM228B-208ENST00000613899 TMEM145Q8NBT3 493 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 EPAS1Q99814 870 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 SYT11Q9BT88 431 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 TM6SF2Q9BZW4 377 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 ZDHHC6Q9H6R6 413 aa23.15■■□□□ 1.3
FAM228B-208ENST00000613899 A0A1W2PQC6 194 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 LRRC53A6NM62 1247 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 PCDH8O95206 1070 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 ADRB3P13945 408 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 HNRNPA2B1P22626 353 aaKnown RBP23.14■■□□□ 1.29
FAM228B-208ENST00000613899 AKT2P31751 481 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 ZNF284Q2VY69 593 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 SPATS2Q86XZ4 545 aaKnown RBP23.14■■□□□ 1.29
FAM228B-208ENST00000613899 LRIG1Q96JA1 1093 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 MAGEB5Q9BZ81 275 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 FZD10Q9ULW2 581 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 ACTL7AQ9Y615 435 aa23.14■■□□□ 1.29
FAM228B-208ENST00000613899 TRPM6Q9BX84 2022 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 RNF103O00237 685 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 SLC31A1O15431 190 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 GSRP00390 522 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 PRLRP16471 622 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 SNRPD1P62314 119 aaKnown RBP23.13■■□□□ 1.29
FAM228B-208ENST00000613899 ASIC2Q16515 512 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 KIAA1161Q6NSJ0 714 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 FBXL19Q6PCT2 694 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 CCNI2Q6ZMN8 369 aaPredicted RBP23.13■■□□□ 1.29
FAM228B-208ENST00000613899 TMPRSS7Q7RTY8 843 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 ZSCAN30Q86W11 494 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 ZNF354CQ86Y25 554 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 PYROXD2Q8N2H3 581 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 GALNT15Q8N3T1 639 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 RYBPQ8N488 228 aaPredicted RBP23.13■■□□□ 1.29
FAM228B-208ENST00000613899 OR2AP1Q8NGE2 309 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 KLHDC7BQ96G42 594 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 CATSPERBQ9H7T0 1116 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 PLXNB3Q9ULL4 1909 aa23.13■■□□□ 1.29
FAM228B-208ENST00000613899 A0A1B0GTH6 734 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 KDELR3O43731 214 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 CREB3O43889 395 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 HTR7P34969 479 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 TMEM259Q4ZIN3 620 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 PARS2Q7L3T8 475 aaKnown RBP23.12■■□□□ 1.29
FAM228B-208ENST00000613899 TMC6Q7Z403 805 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 FAM174AQ8TBP5 190 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 CASKIN2Q8WXE0 1202 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 KLK6Q92876 244 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 MYOCQ99972 504 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 PARVAQ9NVD7 372 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 TAS2R14Q9NYV8 317 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 ZFR2Q9UPR6 939 aaKnown RBP23.12■■□□□ 1.29
FAM228B-208ENST00000613899 CA5BQ9Y2D0 317 aa23.12■■□□□ 1.29
FAM228B-208ENST00000613899 WASH4PA8MWX3 477 aa23.11■■□□□ 1.29
FAM228B-208ENST00000613899 ENC1O14682 589 aa23.11■■□□□ 1.29
FAM228B-208ENST00000613899 FGF10O15520 208 aaPredicted RBP23.11■■□□□ 1.29
FAM228B-208ENST00000613899 AP1G1O43747 822 aa23.11■■□□□ 1.29
FAM228B-208ENST00000613899 LDOC1O95751 146 aaPredicted RBP23.11■■□□□ 1.29
FAM228B-208ENST00000613899 THEGLP0DJG4 465 aa23.11■■□□□ 1.29
FAM228B-208ENST00000613899 YBEYP58557 167 aaPredicted RBP23.11■■□□□ 1.29
FAM228B-208ENST00000613899 RPS21P63220 83 aaKnown RBP23.11■■□□□ 1.29
FAM228B-208ENST00000613899 MAMLD1Q13495 774 aa23.11■■□□□ 1.29
FAM228B-208ENST00000613899 PARP15Q460N3 678 aa23.11■■□□□ 1.29
FAM228B-208ENST00000613899 SFMBT2Q5VUG0 894 aa23.11■■□□□ 1.29
FAM228B-208ENST00000613899 SEL1L3Q68CR1 1132 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms