RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 HAPLN2Q9GZV7 340 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 STX18Q9P2W9 335 aaKnown RBP11.01□□□□□ -0.65
FAM3A-221ENST00000612856 SMG5Q9UPR3 1016 aaKnown RBP11.01□□□□□ -0.65
FAM3A-221ENST00000612856 DNAJC25-GNG10A0A024R161 153 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 FBXO21O94952 628 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 CD48P09326 243 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 CTPS1P17812 591 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 LAG3P18627 525 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 TGM2P21980 687 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 MAPK10P53779 464 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 PDK3Q15120 406 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 MORN1Q5T089 497 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 FOXR2Q6PJQ5 311 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 RNF148Q8N7C7 305 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 TDRD5Q8NAT2 981 aaKnown RBP11.01□□□□□ -0.65
FAM3A-221ENST00000612856 OR6Y1Q8NGX8 325 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 CSGALNACT1Q8TDX6 532 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 CCT7Q99832 543 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 NRDE2Q9H7Z3 1164 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 LIN28AQ9H9Z2 209 aaKnown RBP11.01□□□□□ -0.65
FAM3A-221ENST00000612856 UBAP1Q9NZ09 502 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 MYOCOSA0A1B0GUC4 107 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 NOL3O60936 208 aaKnown RBP11.01□□□□□ -0.65
FAM3A-221ENST00000612856 CILPO75339 1184 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 ALOX15P16050 662 aaPredicted RBP11.01□□□□□ -0.65
FAM3A-221ENST00000612856 PAX3P23760 479 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 EDNRBP24530 442 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 NOS2P35228 1153 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 PCYT1AP49585 367 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 PLIN5Q00G26 463 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 OCRLQ01968 901 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 SLC45A4Q5BKX6 768 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 ATAT1Q5SQI0 421 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 C11orf96Q7Z7L8 435 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 SERINC5Q86VE9 423 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 DUSP16Q9BY84 665 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 THEGQ9P2T0 379 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 DTNAQ9Y4J8 743 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 CPQQ9Y646 472 aa11.01□□□□□ -0.65
FAM3A-221ENST00000612856 CCL22O00626 93 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 SNX2O60749 519 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 HADHAP40939 763 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 EIF2B2P49770 351 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 SEC13P55735 322 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 C6orf183Q5T699 404 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 DPY19L2P1Q6NXN4 242 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 SLC39A5Q6ZMH5 540 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 HFE2Q6ZVN8 426 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 GRASPQ7Z6J2 395 aaPredicted RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 GIPC3Q8TF64 312 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 ELMO2Q96JJ3 720 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 IL1RAPL1Q9NZN1 696 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 GJD2Q9UKL4 321 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 INSL6Q9Y581 213 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 COL1A2P08123 1366 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 RNASEH1O60930 286 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 KRT38O76015 456 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 LSM8O95777 96 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 KCNA5P22460 613 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 MSX2P35548 267 aaPredicted RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 TBL3Q12788 808 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 CDC16Q13042 620 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 SYPL2Q5VXT5 272 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 CCDC149Q6ZUS6 474 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 UNC93AQ86WB7 457 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 NT5DC4Q86YG4 428 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 CRLF3Q8IUI8 442 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 RASGEF1CQ8N431 466 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 ABCC13Q9NSE7 274 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 ADAMTS5Q9UNA0 930 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 PHF24Q9UPV7 400 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 TTC24A2A3L6 582 aaPredicted RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 RNF103O00237 685 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 HNRNPCL1O60812 293 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 COQ9O75208 318 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 FGF18O76093 207 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 SSTR1P30872 391 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 RPS24P62847 133 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 MRPS5P82675 430 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 OASLQ15646 514 aaKnown RBP11□□□□□ -0.65
FAM3A-221ENST00000612856 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 MIPEPQ99797 713 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 MAGEB5Q9BZ81 275 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 NMUR2Q9GZQ4 415 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 EPB41L4BQ9H329 900 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 CYP4F12Q9HCS2 524 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 SELENONQ9NZV5 590 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 DNMT3LQ9UJW3 386 aa11□□□□□ -0.65
FAM3A-221ENST00000612856 TRAV19A0A0A6YYK7 116 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 CAPN8A6NHC0 703 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 DDX3YO15523 660 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 ACADMP11310 421 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 INHBCP55103 352 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 MTTPP55157 894 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PABPC1LQ4VXU2 614 aaKnown RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 TMEM259Q4ZIN3 620 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 MAMDC4Q6UXC1 1216 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 PRR11Q96HE9 360 aaPredicted RBP10.99□□□□□ -0.65
FAM3A-221ENST00000612856 CCSER2Q9H7U1 834 aa10.99□□□□□ -0.65
FAM3A-221ENST00000612856 NOCTQ9UK39 431 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms