RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RNF10Q8N5U6 811 aaKnown RBP22.25■■□□□ 1.15
CBWD3-207ENST00000611426 FAM131CQ96AQ9 280 aa22.25■■□□□ 1.15
CBWD3-207ENST00000611426 AGPAT1Q99943 283 aa22.25■■□□□ 1.15
CBWD3-207ENST00000611426 GDF3Q9NR23 364 aa22.25■■□□□ 1.15
CBWD3-207ENST00000611426 TMPRSS4Q9NRS4 437 aa22.25■■□□□ 1.15
CBWD3-207ENST00000611426 HS3ST2Q9Y278 367 aa22.25■■□□□ 1.15
CBWD3-207ENST00000611426 FARP1Q9Y4F1 1045 aaPredicted RBP22.25■■□□□ 1.15
CBWD3-207ENST00000611426 TP53BP1Q12888 1972 aaPredicted RBP22.24■■□□□ 1.15
CBWD3-207ENST00000611426 FREM2Q5SZK8 3169 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 FANCGO15287 622 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 LATO43561 262 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 PLRG1O43660 514 aaKnown RBP22.24■■□□□ 1.15
CBWD3-207ENST00000611426 MT-CO1P00395 513 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 SRCP12931 536 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 MAT2AP31153 395 aaKnown RBP22.24■■□□□ 1.15
CBWD3-207ENST00000611426 SCAPQ12770 1279 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 CNTN1Q12860 1018 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 NAA35Q5VZE5 725 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 WDR24Q96S15 920 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 PSMB7Q99436 277 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.24■■□□□ 1.15
CBWD3-207ENST00000611426 MPP6Q9NZW5 540 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 TMEM59LQ9UK28 342 aa22.24■■□□□ 1.15
CBWD3-207ENST00000611426 PLXNB3Q9ULL4 1909 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 E9PAM4 449 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 TLR4O00206 839 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 SNAP91O60641 907 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 SRGAP2O75044 1071 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 DKK1O94907 266 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 GZMAP12544 262 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 PTPRBP23467 1997 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 OR1E1P30953 314 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 NOMO3P69849 1222 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 C6orf118Q5T5N4 469 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 NAPEPLDQ6IQ20 393 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 TMPRSS7Q7RTY8 843 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 TFAP2DQ7Z6R9 452 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 GATAD2AQ86YP4 633 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 CCDC114Q96M63 670 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 CFAP57Q96MR6 1250 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 HAPLN3Q96S86 360 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 L2HGDHQ9H9P8 463 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 FTSJ1Q9UET6 329 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 DNAI1Q9UI46 699 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 VPS51Q9UID3 782 aa22.23■■□□□ 1.15
CBWD3-207ENST00000611426 RALYQ9UKM9 306 aaKnown RBP22.23■■□□□ 1.15
CBWD3-207ENST00000611426 LAMA5O15230 3695 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 DSPP15924 2871 aaKnown RBP22.22■■□□□ 1.15
CBWD3-207ENST00000611426 A0A0A6YYK5 440 aaPredicted RBP22.22■■□□□ 1.15
CBWD3-207ENST00000611426 A0A0D9SEW6 157 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 K7ERQ8 282 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 ITGAVP06756 1048 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 CHRNB2P17787 502 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 CDR2Q01850 454 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 CCDC157Q569K6 752 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 AGBL4Q5VU57 503 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 TRNP1Q6NT89 227 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 MFSD2AQ8NA29 543 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 TRIM10Q9UDY6 481 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 GUCA1BQ9UMX6 200 aa22.22■■□□□ 1.15
CBWD3-207ENST00000611426 ANKRD11Q6UB99 2663 aaPredicted RBP22.21■■□□□ 1.15
CBWD3-207ENST00000611426 PKD1L2Q7Z442 2459 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 IGLV3-10A0A075B6K4 115 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 CAPNS1P04632 268 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 TNFAIP3P21580 790 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 RRM1P23921 792 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 CHRNA3P32297 505 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 NUDT1P36639 197 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 ARRB1P49407 418 aaPredicted RBP22.21■■□□□ 1.15
CBWD3-207ENST00000611426 NXPH1P58417 271 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 TCEAL1Q15170 157 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 SHBQ15464 509 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 LINGO4Q6UY18 593 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 ARCQ7LC44 396 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 TRIM69Q86WT6 500 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 FAM131BQ86XD5 332 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 DCAF4L2Q8NA75 395 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 OR2A12Q8NGT7 310 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 SLC20A1Q8WUM9 679 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 SPON2Q9BUD6 331 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 ISCUQ9H1K1 167 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 DMTF1Q9Y222 760 aa22.21■■□□□ 1.15
CBWD3-207ENST00000611426 FAM208BQ5VWN6 2430 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 TAF4O00268 1085 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 KPNA3O00505 521 aaPredicted RBP22.2■■□□□ 1.14
CBWD3-207ENST00000611426 YKT6O15498 198 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 SMAD6O43541 496 aaKnown RBP22.2■■□□□ 1.14
CBWD3-207ENST00000611426 CTSLP07711 333 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 H2AFZP0C0S5 128 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 CLCN6P51797 869 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 ATP11AP98196 1134 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 FMO1Q01740 532 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 CCDC15Q0P6D6 951 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 STAT4Q14765 748 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 ZNF569Q5MCW4 686 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 H2AFVQ71UI9 128 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 BNIPLQ7Z465 357 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 PROSER1Q86XN7 944 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 GALNT15Q8N3T1 639 aa22.2■■□□□ 1.14
CBWD3-207ENST00000611426 EMC1Q8N766 993 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms