RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 OR6K2Q8NGY2 324 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 FRS2Q8WU20 508 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 NSMCE1Q8WV22 266 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 FATE1Q969F0 183 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 MAGOHBQ96A72 148 aaKnown RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 CCDC114Q96M63 670 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 AGAP3Q96P47 875 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 IL12RB2Q99665 862 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 CINPQ9BW66 212 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 FRMD8P1Q9BZ68 369 aaPredicted RBP7.81□□□□□ -1.16
MSH6-211ENST00000606499 BRD8Q9H0E9 1235 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 USP29Q9HBJ7 922 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 C2orf42Q9NWW7 574 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 RNF14Q9UBS8 474 aa7.81□□□□□ -1.16
MSH6-211ENST00000606499 ATG2BQ96BY7 2078 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 TECTAO75443 2155 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 MYLKQ15746 1914 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 EDDM13A0A1B0GTR0 161 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 CXorf51AA0A1B0GTR3 108 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 A0A1W2PQF6 199 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ZBTB24O43167 697 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 MTSS1O43312 755 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 PI15O43692 258 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 SIN3BO75182 1162 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 NEBLO76041 1014 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ZSCAN5DPP0CG00 497 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 HOXB2P14652 356 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ETS1P14921 441 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 NFKB1P19838 968 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 GKP32189 559 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 COILP38432 576 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 VASPP50552 380 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 RENBPP51606 427 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 CCNHP51946 323 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 MRPS21P82921 87 aaKnown RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 CKAP4Q07065 602 aaKnown RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 SLC20A2Q08357 652 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 HNRNPA1L2Q32P51 320 aaKnown RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 C9orf64Q5T6V5 341 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 KIAA1211LQ6NV74 962 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 DRICH1Q6PGQ1 229 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 GSTA5Q7RTV2 222 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ZNF572Q7Z3I7 529 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 METTL3Q86U44 580 aaKnown RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 CACUL1Q86Y37 369 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ZNF567Q8N184 647 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 TAB3Q8N5C8 712 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 PCDH20Q8N6Y1 951 aaKnown RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 KDM1BQ8NB78 822 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 CHST14Q8NCH0 376 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 OR2AP1Q8NGE2 309 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 OR2A12Q8NGT7 310 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 CCDC110Q8TBZ0 833 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 CASKIN2Q8WXE0 1202 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 PTPRN2Q92932 1015 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ISG20Q96AZ6 181 aaKnown RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 RTP4Q96DX8 246 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 NSMCE3Q96MG7 304 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 PSKH2Q96QS6 385 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 NELL2Q99435 816 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 KRT12Q99456 494 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 GABRG3Q99928 467 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 COL25A1Q9BXS0 654 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 CEP44Q9C0F1 390 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ZDHHC6Q9H6R6 413 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 HOMER3Q9NSC5 361 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 RBM22Q9NW64 420 aaKnown RBP eCLIP7.8□□□□□ -1.16
MSH6-211ENST00000606499 KLHL8Q9P2G9 620 aaPredicted RBP7.8□□□□□ -1.16
MSH6-211ENST00000606499 SEPT3Q9UH03 358 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 MMP17Q9ULZ9 603 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 ATP8A1Q9Y2Q0 1164 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 SIT1Q9Y3P8 196 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 LAMA1P25391 3075 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 NCOR1O75376 2440 aa7.8□□□□□ -1.16
MSH6-211ENST00000606499 CFAP69A5D8W1 941 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 FAM86C2PA6NEL3 165 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 CHURC1-FNTBB4DL54 471 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 CCDC188H7C350 402 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 TNFRSF10AO00220 468 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 NPC1O15118 1278 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 INSIG1O15503 277 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 STK10O94804 968 aaKnown RBP7.79□□□□□ -1.16
MSH6-211ENST00000606499 SLC34A2O95436 690 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 IGSF6O95976 241 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 GSRP00390 522 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 IFNB1P01574 187 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 AOC1P19801 751 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 CHRNA3P32297 505 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 CD68P34810 354 aaPredicted RBP7.79□□□□□ -1.16
MSH6-211ENST00000606499 RPS9P46781 194 aaKnown RBP7.79□□□□□ -1.16
MSH6-211ENST00000606499 FNTAP49354 379 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 SCNN1BP51168 640 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 MRPS25P82663 173 aaKnown RBP7.79□□□□□ -1.16
MSH6-211ENST00000606499 DR1Q01658 176 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 DSC2Q02487 901 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 ITKQ08881 620 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 NIPAL4Q0D2K0 466 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 CAMK2GQ13555 558 aaPredicted RBP7.79□□□□□ -1.16
MSH6-211ENST00000606499 TUBB2AQ13885 445 aa7.79□□□□□ -1.16
MSH6-211ENST00000606499 IHHQ14623 411 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms