RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 RECQLP46063 649 aaPredicted RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 RACK1P63244 317 aaKnown RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 TEAD4Q15561 434 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 CARD16Q5EG05 197 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 TXNRD3NBQ6F5E7 133 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 PARS2Q7L3T8 475 aaKnown RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 RYBPQ8N488 228 aaPredicted RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 PCDH20Q8N6Y1 951 aaKnown RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 TMIEQ8NEW7 156 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 SERAC1Q96JX3 654 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 TSPY26PQ9H489 355 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 SLC32A1Q9H598 525 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 CAAP1Q9H8G2 361 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 FZD3Q9NPG1 666 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 MFHAS1Q9Y4C4 1052 aa12.52□□□□□ -0.41
CTSA-210ENST00000606000 FARP1Q9Y4F1 1045 aaPredicted RBP12.52□□□□□ -0.41
CTSA-210ENST00000606000 WASH4PA8MWX3 477 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 EEF2KO00418 725 aaKnown RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 VILLO15195 856 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 BUB1O43683 1085 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 TMCC1O94876 653 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 ETFBP38117 255 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 AIF1P55008 147 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 C21orf59P57076 290 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 SIM1P81133 766 aaPredicted RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 NFKBIBQ15653 356 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 SMTNL2Q2TAL5 461 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 PPP6R3Q5H9R7 873 aaPredicted RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 LRRC73Q5JTD7 316 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 SEL1L3Q68CR1 1132 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 IL27RAQ6UWB1 636 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 ERN2Q76MJ5 926 aaKnown RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 TRIM69Q86WT6 500 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 CPNE8Q86YQ8 564 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 TP53INP2Q8IXH6 220 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 NPWQ8N729 165 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 FNIP1Q8TF40 1166 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 EXOC2Q96KP1 924 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 HEPHQ9BQS7 1158 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 LRRC19Q9H756 370 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 CATSPERBQ9H7T0 1116 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 DYRK4Q9NR20 520 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 HECAQ9UBI9 543 aaPredicted RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 GGT7Q9UJ14 662 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 NENFQ9UMX5 172 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 ZFR2Q9UPR6 939 aaKnown RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 ITM2BQ9Y287 266 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 LUC7L2Q9Y383 392 aaKnown RBP12.51□□□□□ -0.41
CTSA-210ENST00000606000 SCINQ9Y6U3 715 aa12.51□□□□□ -0.41
CTSA-210ENST00000606000 A0A1W2PQU0 124 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 J3KR12 359 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 KRIT1O00522 736 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 INSIG1O15503 277 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 FGF10O15520 208 aaPredicted RBP12.5□□□□□ -0.41
CTSA-210ENST00000606000 CBFA2T3O75081 653 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 RNF8O76064 485 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 MYBL1P10243 752 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 ADRB3P13945 408 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 DESP17661 470 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 CD38P28907 300 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 ABL2P42684 1182 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 NEK3P51956 506 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 SLC20A2Q08357 652 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 SLC14A1Q13336 389 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 SERINC3Q13530 473 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 SHBQ15464 509 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 ERMARDQ5T6L9 678 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 NAPEPLDQ6IQ20 393 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 KDM7AQ6ZMT4 941 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 ARHGAP36Q6ZRI8 547 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 RFX8Q6ZV50 586 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 PRPF39Q86UA1 669 aaKnown RBP12.5□□□□□ -0.41
CTSA-210ENST00000606000 GATAD2AQ86YP4 633 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 UMODL1-AS1Q8N2C9 162 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 OR2AP1Q8NGE2 309 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 SETD7Q8WTS6 366 aaKnown RBP12.5□□□□□ -0.41
CTSA-210ENST00000606000 TRIM11Q96F44 468 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 SLC39A8Q9C0K1 460 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 KDM4CQ9H3R0 1056 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 RETREG1Q9H6L5 497 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 PDFQ9HBH1 243 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 PREBQ9HCU5 417 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 LHX3Q9UBR4 397 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 ANGPTL2Q9UKU9 493 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 PCOLCE2Q9UKZ9 415 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 HPCAL4Q9UM19 191 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 WASF3Q9UPY6 502 aa12.5□□□□□ -0.41
CTSA-210ENST00000606000 SLC31A1O15431 190 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 SPINT1O43278 529 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 HYAL3O43820 417 aaPredicted RBP12.49□□□□□ -0.41
CTSA-210ENST00000606000 PRPSAP2O60256 369 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 PCDH8O95206 1070 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 GSRP00390 522 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 UGT2B4P06133 528 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 ZNF883P0CG24 379 aa12.49□□□□□ -0.41
CTSA-210ENST00000606000 ERCC2P18074 760 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms