RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ALG14Q96F25 216 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 OXNAD1Q96HP4 312 aaPredicted RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 MUC3BQ9H195 1237 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 MAGEH1Q9H213 219 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 CDC42EP4Q9H3Q1 356 aaKnown RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 ATP13A1Q9HD20 1204 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 INTS9Q9NV88 658 aaKnown RBP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 RBM22Q9NW64 420 aaKnown RBP eCLIP17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 OR51B4Q9Y5P0 310 aa17.65■□□□□ 0.42
PPFIA3-207ENST00000602716 A0A1W2PPC1 479 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 CHADO15335 359 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 MTSS1O43312 755 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 CD70P32970 193 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 LMAN2Q12907 356 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 IHHQ14623 411 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 MPPE1Q53F39 396 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 LY6G5CQ5SRR4 150 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 TIGD7Q6NT04 549 aaPredicted RBP17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 LINGO4Q6UY18 593 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 APCDD1Q8J025 514 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 CELF5Q8N6W0 485 aaKnown RBP17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 PDCD7Q8N8D1 485 aaKnown RBP17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 CCDC197Q8NCU1 140 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 SPATA22Q8NHS9 363 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 SMARCD2Q92925 531 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 MSLNLQ96KJ4 702 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 ACE2Q9BYF1 805 aaPredicted RBP17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 POMKQ9H5K3 350 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 LMCD1Q9NZU5 365 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 CHD5Q8TDI0 1954 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 NEDD8-MDP1E9PL57 170 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 TRIM24O15164 1050 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 HOXB8P17481 243 aaPredicted RBP17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 ARF5P84085 180 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 CAV1Q03135 178 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 IL10RBQ08334 325 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 PIGWQ7Z7B1 504 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 RBM15Q96T37 977 aaKnown RBP eCLIP17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 KDM4CQ9H3R0 1056 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 NT5MQ9NPB1 228 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 DONSONQ9NYP3 566 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 ZMYM5Q9UJ78 669 aa17.64■□□□□ 0.41
PPFIA3-207ENST00000602716 TYW5A2RUC4 315 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 CBX4O00257 560 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 USP12O75317 370 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 CD160O95971 181 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 MT-CYBP00156 380 aaPredicted RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 PENKP01210 267 aaPredicted RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 ARSAP15289 507 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 SP100P23497 879 aaPredicted RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 GTF2A1P52655 376 aaPredicted RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 OXCT1P55809 520 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 COL19A1Q14993 1142 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 PARP6Q2NL67 630 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 SWT1Q5T5J6 900 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 TANGO2Q6ICL3 276 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 TAOK1Q7L7X3 1001 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 CAND1Q86VP6 1230 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 LRRC49Q8IUZ0 686 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 LRRC34Q8IZ02 419 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 C9orf72Q96LT7 481 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 SERPINB12Q96P63 405 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 FERMT1Q9BQL6 677 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 FEM1AQ9BSK4 669 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 KIF9Q9HAQ2 790 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 SLC40A1Q9NP59 571 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 SPHK2Q9NRA0 654 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 TRHDEQ9UKU6 1024 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 INTS6Q9UL03 887 aaKnown RBP17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 CDH7Q9ULB5 785 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 COL4A3Q01955 1670 aa17.63■□□□□ 0.41
PPFIA3-207ENST00000602716 TMEM265A0A087WTH1 108 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 HEPACAM2A8MVW5 462 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 ZMPSTE24O75844 475 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 FDFT1P37268 417 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 SCTRP47872 440 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 PCGF5Q86SE9 256 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 TEX26Q8N6G2 289 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 IRF7Q92985 503 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 LMLNQ96KR4 655 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 VAT1Q99536 393 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 BBS2Q9BXC9 721 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 GLOD4Q9HC38 313 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 SAYSD1Q9NPB0 183 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 VPS51Q9UID3 782 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 KDELR3O43731 214 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 CYP17A1P05093 508 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 TPSB2P20231 275 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 WEE1P30291 646 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 HLA-FP30511 346 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 RGRP47804 291 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 DSC2Q02487 901 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 NIPAL4Q0D2K0 466 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 HNRNPDQ14103 355 aaKnown RBP17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 ITIH4Q14624 930 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 TPSAB1Q15661 275 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 HIF1AQ16665 826 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 ANO4Q32M45 955 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 MPP7Q5T2T1 576 aa17.62■□□□□ 0.41
PPFIA3-207ENST00000602716 TMCO4Q5TGY1 634 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms