RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PGK1P00558 417 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 FAM163BP0C2L3 166 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 VCLP18206 1134 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 PDCD2Q16342 344 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 GRAMD1BQ3KR37 738 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 LRRC8EQ6NSJ5 796 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 ESRP1Q6NXG1 681 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 PKN3Q6P5Z2 889 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 LINC00523Q86TU6 105 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 SPNS2Q8IVW8 549 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 TMEM86AQ8N2M4 240 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 KYQ8NBH2 561 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 RCN3Q96D15 328 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 TBL1YQ9BQ87 522 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 RRN3Q9NYV6 651 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 STK39Q9UEW8 545 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 C17orf102A2RUQ5 167 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 TMEM233B4DJY2 109 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 TARM1B6A8C7 271 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 ARNTP27540 789 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 THOP1P52888 689 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 PRKAA1Q13131 559 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 PAXIP1Q6ZW49 1069 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 MYLPFQ96A32 169 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 NXNL1Q96CM4 212 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 CDRT15Q96T59 188 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 NSMCE4AQ9NXX6 385 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 SLC2A6Q9UGQ3 507 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 NEU3Q9UQ49 428 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 INPP5FQ9Y2H2 1132 aa20.51■□□□□ 0.87
SHKBP1-225ENST00000600733 CASQ2O14958 399 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 THP07101 528 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 PPARGP37231 505 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 CYLC2Q14093 348 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 MMEL1Q495T6 779 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 PCID2Q5JVF3 399 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 KDELC2Q7Z4H8 507 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 GALNT15Q8N3T1 639 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 RNF148Q8N7C7 305 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 CCNYL1Q8N7R7 359 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 DQX1Q8TE96 717 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 FAM192AQ9GZU8 254 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 SLC38A7Q9NVC3 462 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 CDH9Q9ULB4 789 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 ACOT9Q9Y305 439 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 PTCH2Q9Y6C5 1203 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 CACNG3O60359 315 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 BDNFP23560 247 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 PKNOX1P55347 436 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 NSUN2Q08J23 767 aaKnown RBP eCLIP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 FAM110CQ1W6H9 321 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 PAN2Q504Q3 1202 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 DENND5AQ6IQ26 1287 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 RP9Q8TA86 221 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 GPR78Q96P69 363 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 FICDQ9BVA6 458 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 ZNF385DQ9H6B1 395 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 CDYLQ9Y232 598 aa20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 AAR2Q9Y312 384 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-225ENST00000600733 FAM95CA0A1B0GW59 222 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 CAPN8A6NHC0 703 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 TXNDC9O14530 226 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 CFLARO15519 480 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 ZNF865P0CJ78 1059 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 XRCC1P18887 633 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 ARCN1P48444 511 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 RAB10P61026 200 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 TSTD2Q5T7W7 516 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 FBXL19Q6PCT2 694 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 C16orf89Q6UX73 402 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 ARHGAP12Q8IWW6 846 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 ATPAF2Q8N5M1 289 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 USP13Q92995 863 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 SGF29Q96ES7 293 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 GCNAQ96QF7 691 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 PTPN18Q99952 460 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 RTP3Q9BQQ7 232 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 ATXN3LQ9H3M9 355 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 FAM105AQ9NUU6 356 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 PRPF19Q9UMS4 504 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 SCN4AP35499 1836 aa20.49■□□□□ 0.87
SHKBP1-225ENST00000600733 AP3B1O00203 1094 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 ENO3P13929 434 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 SCNN1GP51170 649 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 ZNF135P52742 658 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 XIAPP98170 497 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 TIGD5Q53EQ6 642 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 BNC2Q6ZN30 1099 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 SDCCAG8Q86SQ7 713 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 PQLC1Q8N2U9 271 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 CPSF7Q8N684 471 aaKnown RBP20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 SCAMP5Q8TAC9 235 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 TSGA13Q96PP4 275 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 CSNK1G1Q9HCP0 422 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 STX16-NPEPL1H3BU86 382 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 STMN1P16949 149 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 DPP6P42658 865 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 SLC1A2P43004 574 aa20.48■□□□□ 0.87
SHKBP1-225ENST00000600733 ALDH1A3P47895 512 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms