RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 EPCAMP16422 314 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 DRD4P21917 467 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 SPARCL1Q14515 664 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 FOXR1Q6PIV2 292 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 POTEHQ6S545 545 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 PRPF39Q86UA1 669 aaKnown RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 CTAGE3PQ8IX95 158 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 CMTM8Q8IZV2 173 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 PPM1NQ8N819 430 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ARNTL2Q8WYA1 636 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 WBP2Q969T9 261 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ALKBH8Q96BT7 664 aaKnown RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 ZNF317Q96PQ6 595 aaPredicted RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 ARNT2Q9HBZ2 717 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 NT5MQ9NPB1 228 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 UBA2Q9UBT2 640 aaPredicted RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 MTCL1Q9Y4B5 1905 aaKnown RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 FAM237BA0A1B0GVD1 139 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 EBAG9O00559 213 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 TSPAN3O60637 253 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 RFPL2O75678 378 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 USP1O94782 785 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 CYBBP04839 570 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ADRA1AP35348 466 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ZXDBP98169 803 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 MPP2Q14168 576 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ZNF235Q14590 738 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 LRRC14Q15048 493 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ALG1LQ6GMV1 187 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 FAM109BQ6ICB4 259 aaPredicted RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 TMEM135Q86UB9 458 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 TAX1BP1Q86VP1 789 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 SPATS2Q86XZ4 545 aaKnown RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 C4orf33Q8N1A6 199 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ZNF557Q8N988 423 aaPredicted RBP20.35■□□□□ 0.85
PNKP-214ENST00000600573 CKAP2Q8WWK9 683 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 FSD1LQ9BXM9 530 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 KIF9Q9HAQ2 790 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 ATP13A1Q9HD20 1204 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 SYBUQ9NX95 663 aa20.35■□□□□ 0.85
PNKP-214ENST00000600573 SPAG7O75391 227 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 EPOP01588 193 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 MT-ND3P03897 115 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 HOXD9P28356 352 aaPredicted RBP20.34■□□□□ 0.85
PNKP-214ENST00000600573 WEE1P30291 646 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 ITKQ08881 620 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 CXorf57Q6NSI4 855 aaKnown RBP20.34■□□□□ 0.85
PNKP-214ENST00000600573 RANBP10Q6VN20 620 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 CPLX4Q7Z7G2 160 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 TADA1Q96BN2 335 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 PSKH2Q96QS6 385 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 SPON2Q9BUD6 331 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 TLE6Q9H808 572 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 TBC1D14Q9P2M4 693 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 YBX2Q9Y2T7 364 aaKnown RBP20.34■□□□□ 0.85
PNKP-214ENST00000600573 HCFC2Q9Y5Z7 792 aa20.34■□□□□ 0.85
PNKP-214ENST00000600573 A0A0D9SEW6 157 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 A0A1W2PPM1 405 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 PIAS1O75925 651 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 KRT37O76014 449 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 ZWINTO95229 277 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 CNTFP26441 200 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 SERPINB9P50453 376 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 IL9RQ01113 521 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 LAMB3Q13751 1172 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 INO80DQ53TQ3 878 aaPredicted RBP20.33■□□□□ 0.84
PNKP-214ENST00000600573 PCID2Q5JVF3 399 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 PRSS36Q5K4E3 855 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 RNF219Q5W0B1 726 aaPredicted RBP20.33■□□□□ 0.84
PNKP-214ENST00000600573 METTL3Q86U44 580 aaKnown RBP20.33■□□□□ 0.84
PNKP-214ENST00000600573 TDRD5Q8NAT2 981 aaKnown RBP20.33■□□□□ 0.84
PNKP-214ENST00000600573 SPATA22Q8NHS9 363 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 PPP2R3CQ969Q6 453 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 MUC3BQ9H195 1237 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 MRM3Q9HC36 420 aaKnown RBP20.33■□□□□ 0.84
PNKP-214ENST00000600573 TDP1Q9NUW8 608 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 HCFC1R1Q9NWW0 138 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 SOX13Q9UN79 622 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 FAM169AQ9Y6X4 670 aa20.33■□□□□ 0.84
PNKP-214ENST00000600573 CCDC195A0A1B0GUA6 201 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 TYROBPO43914 113 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 MOSPD3O75425 235 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 CSPG5O95196 566 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 MT-CYBP00156 380 aaPredicted RBP20.32■□□□□ 0.84
PNKP-214ENST00000600573 KRT4P19013 534 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 CA4P22748 312 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 CCR2P41597 374 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 SGSHP51688 502 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 WNT3AP56704 352 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 SLC12A1Q13621 1099 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 CDH18Q13634 790 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 CRYMQ14894 314 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 TEAD2Q15562 447 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 DUSP6Q16828 381 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 RNF43Q68DV7 783 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 KDELC1Q6UW63 502 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 MICALCLQ6ZW33 695 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 MARK2Q7KZI7 788 aaKnown RBP20.32■□□□□ 0.84
PNKP-214ENST00000600573 CARNMT1Q8N4J0 409 aa20.32■□□□□ 0.84
PNKP-214ENST00000600573 IPMKQ8NFU5 416 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms