RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 E9PAM4 449 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 C1QTNF3-AMACRE9PGA6 284 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 MID1O15344 667 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 DDX3YO15523 660 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC7A4O43246 635 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 RNASEH2AO75792 299 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 CD48P09326 243 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 ZNF883P0CG24 379 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 GOT1P17174 413 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 CTNNA2P26232 953 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 MAOBP27338 520 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 OR1E1P30953 314 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC1A1P43005 524 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 STK19P49842 368 aaPredicted RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 ARSEP51690 589 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC20A2Q08357 652 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 SCAPQ12770 1279 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 GRIK2Q13002 908 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 AADACL2Q6P093 401 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 PEX26Q7Z412 305 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 SH2D3CQ8N5H7 860 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 DCAF4L2Q8NA75 395 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 OR2T34Q8NGX1 318 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 FRS2Q8WU20 508 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 SKA1Q96BD8 255 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 WDR24Q96S15 920 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 KDM4CQ9H3R0 1056 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 DHX35Q9H5Z1 703 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 C6orf106Q9H6K1 298 aaPredicted RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 LCMT1Q9UIC8 334 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 AMFRQ9UKV5 643 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 CEP295Q9C0D2 2601 aa13.09□□□□□ -0.31
SH2D3A-208ENST00000599563 ENC1O14682 589 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 MCF2LO15068 1137 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 CNTN5O94779 1100 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 FSBPO95073 299 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 IL1BP01584 269 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 KRT1P04264 644 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 CTNNA1P35221 906 aaKnown RBP13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 NUDT1P36639 197 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 GRIA4P48058 902 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 PSMD8P48556 350 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 CCR5P51681 352 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 AIF1P55008 147 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 SHC2P98077 582 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 DLG2Q15700 870 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 HADHQ16836 314 aaKnown RBP13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 ALFQ53S48 1182 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 EFHC2Q5JST6 749 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 ERMARDQ5T6L9 678 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 N4BP2L1Q5TBK1 243 aaPredicted RBP13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 MEI1Q5TIA1 1274 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 KIAA0895LQ68EN5 471 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 RETSATQ6NUM9 610 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 PIP4P1Q86T03 277 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 RHOT1Q8IXI2 618 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 SYCE1Q8N0S2 351 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 TRIM58Q8NG06 486 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 C1orf216Q8TAB5 229 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 RAPGEF5Q92565 580 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 ALG3Q92685 438 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 BIRC7Q96CA5 298 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 CALR3Q96L12 384 aaKnown RBP13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 OSBPL2Q9H1P3 480 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 PCDH18Q9HCL0 1135 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 OR12D3Q9UGF7 316 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 ANGPTL2Q9UKU9 493 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 PLXNA2O75051 1894 aa13.08□□□□□ -0.32
SH2D3A-208ENST00000599563 A0A1W2PP55 124 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 DFNA5O60443 496 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 SRGAP2O75044 1071 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 ATP1A1P05023 1023 aaKnown RBP13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 PMLP29590 882 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 L1CAMP32004 1257 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 RECQLP46063 649 aaPredicted RBP13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 MAPKAPK2P49137 400 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 PEX5P50542 639 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 CDH6P55285 790 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 GEMIN4P57678 1058 aaKnown RBP13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 GNG11P61952 73 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 RACK1P63244 317 aaKnown RBP13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 LLGL1Q15334 1064 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 DPYSL2Q16555 572 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 PPP6R3Q5H9R7 873 aaPredicted RBP13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 NYAP1Q6ZVC0 841 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
SH2D3A-208ENST00000599563 TFAP2DQ7Z6R9 452 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms