RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, human

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPE-208	ENST00000598969	CTSO	P43234	321 aa	Predicted RBP	21.27	■■□□□ 1
COPE-208	ENST00000598969	RNASEH2B	Q5TBB1	312 aa	Known RBP	21.27	■■□□□ 1
COPE-208	ENST00000598969	ARHGEF18	Q6ZSZ5	1173 aa		21.27	■■□□□ 1
COPE-208	ENST00000598969	CCDC25	Q86WR0	208 aa		21.27	■■□□□ 1
COPE-208	ENST00000598969	AHI1	Q8N157	1196 aa		21.27	■■□□□ 1
COPE-208	ENST00000598969	PGBD5	Q8N414	524 aa		21.27	■■□□□ 1
COPE-208	ENST00000598969	NSMCE1	Q8WV22	266 aa		21.27	■■□□□ 1
COPE-208	ENST00000598969	DEC1	Q9P2X7	70 aa		21.27	■■□□□ 1
COPE-208	ENST00000598969	KIAA1549L	Q6ZVL6	1849 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	MMP13	P45452	471 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	CYTH1	Q15438	398 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	FAXC	Q5TGI0	409 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	MBLAC2	Q68D91	279 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	GRAMD4	Q6IC98	578 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	HOOK3	Q86VS8	718 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	IQCK	Q8N0W5	287 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	ZCCHC9	Q8N567	271 aa	Known RBP	21.26	■□□□□ 0.99
COPE-208	ENST00000598969	TTC17	Q96AE7	1141 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	GORASP1	Q9BQQ3	440 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	ETNK1	Q9HBU6	452 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	MED4	Q9NPJ6	270 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	TICRR	Q7Z2Z1	1910 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969	COL4A2	P08572	1712 aa		21.26	■□□□□ 0.99
COPE-208	ENST00000598969		F5H423	210 aa	Predicted RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	MUSK	O15146	869 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	NFKB1	P19838	968 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	PSMB4	P28070	264 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	SOX9	P48436	509 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	FAM193A	P78312	1265 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	RFTN1	Q14699	578 aa	Predicted RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	INO80D	Q53TQ3	878 aa	Predicted RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	RETSAT	Q6NUM9	610 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	GBA3	Q9H227	469 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	PABPC3	Q9H361	631 aa	Known RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	NT5M	Q9NPB1	228 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	TRPV5	Q9NQA5	729 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	RAB6B	Q9NRW1	208 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	MYO18A	Q92614	2054 aa	Known RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969		K7ERQ8	282 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	OPA1	O60313	960 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	EIF2D	P41214	584 aa	Known RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	BASP1	P80723	227 aa	Known RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	KDSR	Q06136	332 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	PARP6	Q2NL67	630 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	TRMT10C	Q7L0Y3	403 aa	Known RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	GOLGA6L1	Q8N7Z2	621 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	CSGALNACT1	Q8TDX6	532 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	WFIKKN2	Q8TEU8	576 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	CPT1B	Q92523	772 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	ZIM3	Q96PE6	472 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	GLOD4	Q9HC38	313 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	RSPH14	Q9UHP6	348 aa		21.25	■□□□□ 0.99
COPE-208	ENST00000598969	FARP1	Q9Y4F1	1045 aa	Predicted RBP	21.25	■□□□□ 0.99
COPE-208	ENST00000598969	MIA3	Q5JRA6	1907 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	CXorf51A	A0A1B0GTR3	108 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	PRRT4	C9JH25	899 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	TMCC1	O94876	653 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	SERPINH1	P50454	418 aa	Known RBP	21.24	■□□□□ 0.99
COPE-208	ENST00000598969	MAX	P61244	160 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	ITPRIPL1	Q6GPH6	555 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	RPL10L	Q96L21	214 aa	Known RBP	21.24	■□□□□ 0.99
COPE-208	ENST00000598969	PSKH2	Q96QS6	385 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	SEPT3	Q9UH03	358 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	PLAA	Q9Y263	795 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	MYO10	Q9HD67	2058 aa		21.24	■□□□□ 0.99
COPE-208	ENST00000598969	SMAD6	O43541	496 aa	Known RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	NARS	O43776	548 aa	Known RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	NEBL	O76041	1014 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	POLR2E	P19388	210 aa	Known RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	FDFT1	P37268	417 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	STK19	P49842	368 aa	Predicted RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	ECT2L	Q008S8	904 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	SULT2A1	Q06520	285 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	ZNF235	Q14590	738 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	UAP1	Q16222	522 aa	Predicted RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	LRIG3	Q6UXM1	1119 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	SFTPA1	Q8IWL2	248 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	TERB1	Q8NA31	727 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	SORCS1	Q8WY21	1168 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	HS3ST2	Q9Y278	367 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	FCF1	Q9Y324	198 aa	Known RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	TTLL3	Q9Y4R7	772 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	TCRBV7S3A2	A0A539	114 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	GEMIN4	P57678	1058 aa	Known RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	SLC20A2	Q08357	652 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	NIPAL4	Q0D2K0	466 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	SEMA5A	Q13591	1074 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	KCNJ11	Q14654	390 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	ANKRD22	Q5VYY1	191 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	DENND2C	Q68D51	928 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	RELL1	Q8IUW5	271 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	NAT8L	Q8N9F0	302 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	PRCC	Q92733	491 aa	Predicted RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	MRGPRX3	Q96LB0	322 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	FCRL5	Q96RD9	977 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	MGME1	Q9BQP7	344 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	CINP	Q9BW66	212 aa	Predicted RBP	21.23	■□□□□ 0.99
COPE-208	ENST00000598969	THEG	Q9P2T0	379 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	LHX3	Q9UBR4	397 aa		21.23	■□□□□ 0.99
COPE-208	ENST00000598969	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	21.22	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms