RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SLC7A4O43246 635 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 RNGTTO60942 597 aaKnown RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 LEFTY1O75610 366 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 ATXN1LP0C7T5 689 aaKnown RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 PRLRP16471 622 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 CCT8P50990 548 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 CLCN6P51797 869 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF143P52747 638 aaPredicted RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 HNRNPDQ14103 355 aaKnown RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 SHBQ15464 509 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 RETSATQ6NUM9 610 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 DCUN1D2Q6PH85 259 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 DBX2Q6ZNG2 339 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 ZNF571Q7Z3V5 609 aaPredicted RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 SLFN11Q7Z7L1 901 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 PRPF39Q86UA1 669 aaKnown RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 TMIEQ8NEW7 156 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 BAHD1Q8TBE0 780 aaPredicted RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 ARHGEF2Q92974 986 aaKnown RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 NTAN1Q96AB6 310 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 TMEM121BQ9BXQ6 578 aaPredicted RBP14.03□□□□□ -0.16
SCAF1-203ENST00000598359 TRIM7Q9C029 511 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 KLC2Q9H0B6 622 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 HAUS4Q9H6D7 363 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 FZD3Q9NPG1 666 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 TMEM248Q9NWD8 314 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 GPATCH2LQ9NWQ4 482 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 PCDHGB2Q9Y5G2 931 aa14.03□□□□□ -0.16
SCAF1-203ENST00000598359 A0A1B0GTH6 734 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 A0A1W2PQU0 124 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 ANKRD62A6NC57 917 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 SLC31A1O15431 190 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 FLRT2O43155 660 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 CREB3O43889 395 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 RAMP2O60895 175 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 SERPINC1P01008 464 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 PRNPP04156 253 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 PTMAP06454 111 aaKnown RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 CCDC172P0C7W6 258 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 SKILP12757 684 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 MSNP26038 577 aaKnown RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 RECQLP46063 649 aaPredicted RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 MAPKAPK2P49137 400 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 CCNHP51946 323 aaPredicted RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 NXPH1P58417 271 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 TPM4P67936 248 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 SCAPQ12770 1279 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 CCDC157Q569K6 752 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 CARD16Q5EG05 197 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 EFHC2Q5JST6 749 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 NAPEPLDQ6IQ20 393 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 RAB44Q7Z6P3 723 aaPredicted RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 TRIM69Q86WT6 500 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 SPATS2Q86XZ4 545 aaKnown RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 MARCH9Q86YJ5 346 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 PCDH20Q8N6Y1 951 aaKnown RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 GATA6Q92908 595 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 ELF4Q99607 663 aaPredicted RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 CNPY3Q9BT09 278 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 TRIM5Q9C035 493 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 KDM4CQ9H3R0 1056 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 NOL6Q9H6R4 1146 aaKnown RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 ZDHHC6Q9H6R6 413 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 CAAP1Q9H8G2 361 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 DYRK4Q9NR20 520 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 FZD10Q9ULW2 581 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 MYO6Q9UM54 1294 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 LAMA5O15230 3695 aa14.02□□□□□ -0.17
SCAF1-203ENST00000598359 TP53BP1Q12888 1972 aaPredicted RBP14.02□□□□□ -0.17
SCAF1-203ENST00000598359 ITPR1Q14643 2758 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 FLNBO75369 2602 aaKnown RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 A0A1B0GTQ1 180 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 A0A1W2PQC6 194 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 TLR4O00206 839 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 DDX3XO00571 662 aaKnown RBP eCLIP14.01□□□□□ -0.176e-7■■□□□ 12.6
SCAF1-203ENST00000598359 EPHB2P29323 1055 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 L1CAMP32004 1257 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 SLC20A2Q08357 652 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 MAMLD1Q13495 774 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 SUZ12Q15022 739 aaKnown RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 POLD3Q15054 466 aaPredicted RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 ATXN7L2Q5T6C5 722 aaPredicted RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 SFMBT2Q5VUG0 894 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 SEL1L3Q68CR1 1132 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 ERN2Q76MJ5 926 aaKnown RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 TMC6Q7Z403 805 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 GLRX5Q86SX6 157 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 ZNF354CQ86Y25 554 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 RYBPQ8N488 228 aaPredicted RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 HEPHQ9BQS7 1158 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 CEP44Q9C0F1 390 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 TTYH3Q9C0H2 523 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 MAGEH1Q9H213 219 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 PREBQ9HCU5 417 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 GDF3Q9NR23 364 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 TOR4AQ9NXH8 423 aa14.01□□□□□ -0.17
SCAF1-203ENST00000598359 HECAQ9UBI9 543 aaPredicted RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 ZFR2Q9UPR6 939 aaKnown RBP14.01□□□□□ -0.17
SCAF1-203ENST00000598359 NEUROG3Q9Y4Z2 214 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms