RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 TMEM253P0C7T8 217 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 RARAP10276 462 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 CSNK1EP49674 416 aaKnown RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 ARSEP51690 589 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 ZNF75DP51815 510 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 CCNHP51946 323 aaPredicted RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 ZNF135P52742 658 aaPredicted RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 NDST2P52849 883 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 GEMIN4P57678 1058 aaKnown RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 PPP2CBP62714 309 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 PPP2CAP67775 309 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 GRIK2Q13002 908 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 SMTNL2Q2TAL5 461 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 INO80DQ53TQ3 878 aaPredicted RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 KCNT1Q5JUK3 1230 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 H2AFVQ71UI9 128 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 TP53INP2Q8IXH6 220 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 ZNF564Q8TBZ8 553 aaPredicted RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 FAM71BQ8TC56 605 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 TEKT4Q8WW24 435 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 SNX19Q92543 992 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 TSC1Q92574 1164 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 CELF6Q96J87 481 aaKnown RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 CCDC114Q96M63 670 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 HEPHQ9BQS7 1158 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 HDAC8Q9BY41 377 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 TM6SF2Q9BZW4 377 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 SLC39A8Q9C0K1 460 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 KDM4CQ9H3R0 1056 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 PDFQ9HBH1 243 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 SPTLC3Q9NUV7 552 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 ETNK2Q9NVF9 386 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
C19orf54-208ENST00000598352 UVRAGQ9P2Y5 699 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 IL36AQ9UHA7 158 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 MFHAS1Q9Y4C4 1052 aa12.66□□□□□ -0.38
C19orf54-208ENST00000598352 NYNRINQ9P2P1 1898 aaKnown RBP12.65□□□□□ -0.38
C19orf54-208ENST00000598352 A0A1B0GVT2 93 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 MED19A0JLT2 244 aaPredicted RBP12.65□□□□□ -0.38
C19orf54-208ENST00000598352 UPK3BL1B0FP48 263 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 UPK3BL2E5RIL1 263 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 J3KR12 359 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 WNT9AO14904 365 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 BUB1O43683 1085 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 PROSCO94903 275 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 GSRP00390 522 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 TPM1P09493 284 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 IL4RP24394 825 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 GKP32189 559 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 MAPK8P45983 427 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 PAPOLAP51003 745 aaKnown RBP12.65□□□□□ -0.38
C19orf54-208ENST00000598352 DNA2P51530 1060 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 CYTH1Q15438 398 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 PPP6R3Q5H9R7 873 aaPredicted RBP12.65□□□□□ -0.38
C19orf54-208ENST00000598352 ATXN7L2Q5T6C5 722 aaPredicted RBP12.65□□□□□ -0.38
C19orf54-208ENST00000598352 PIP4P1Q86T03 277 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 CNGA4Q8IV77 575 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 MINDY1Q8N5J2 469 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 GRIN3AQ8TCU5 1115 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 CASKIN2Q8WXE0 1202 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 CSPG4P5Q96PW8 444 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 ZDHHC5Q9C0B5 715 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 ZWILCHQ9H900 591 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 PCDH18Q9HCL0 1135 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 DNAAF2Q9NVR5 837 aaKnown RBP12.65□□□□□ -0.38
C19orf54-208ENST00000598352 DONSONQ9NYP3 566 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 CTTNBP2NLQ9P2B4 639 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 HECAQ9UBI9 543 aaPredicted RBP12.65□□□□□ -0.38
C19orf54-208ENST00000598352 LHX3Q9UBR4 397 aa12.65□□□□□ -0.38
C19orf54-208ENST00000598352 TPRP12270 2363 aaKnown RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3DA0A087WVF3 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3IA0A087WXS9 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3EA0A087X179 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3KA0A087X1G2 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 A0A1W2PR77 199 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3FA6NER0 549 aaPredicted RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3LB9A6J9 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 KPNA3O00505 521 aaPredicted RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 AKR1B10O60218 316 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 POP4O95707 220 aaKnown RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 WNT1P04628 370 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 SYPP08247 313 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3HP0C7X1 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 CD59P13987 128 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 AMPD1P23109 780 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 ITGB7P26010 798 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 AFF3P51826 1226 aaKnown RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TSR1Q2NL82 804 aaKnown RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 ATP13A4Q4VNC1 1196 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3GQ6DHY5 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TBC1D3CQ6IPX1 549 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 LAYNQ6UX15 382 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 ARHGAP36Q6ZRI8 547 aa12.64□□□□□ -0.39
C19orf54-208ENST00000598352 ERN2Q76MJ5 926 aaKnown RBP12.64□□□□□ -0.39
C19orf54-208ENST00000598352 TRIM69Q86WT6 500 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms