RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RHOT2Q8IXI1 618 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 CCDC170Q8IYT3 715 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 LZTR1Q8N653 840 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 FAM71BQ8TC56 605 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 CSPG4P5Q96PW8 444 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 HEPHQ9BQS7 1158 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 EDEM2Q9BV94 578 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 TM6SF2Q9BZW4 377 aa17.03■□□□□ 0.32
SSBP4-204ENST00000597724 HECAQ9UBI9 543 aaPredicted RBP17.03■□□□□ 0.32
SSBP4-204ENST00000597724 CACNA1EQ15878 2313 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 A0A1B0GTW7 788 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 FAM47DPA6NHR8 397 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 J3KR12 359 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 KPNA3O00505 521 aaPredicted RBP17.02■□□□□ 0.32
SSBP4-204ENST00000597724 SLC30A4O14863 429 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 SLC7A4O43246 635 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 PRAMEF11O60813 436 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 LEFTY1O75610 366 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 TMCC1O94876 653 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 FSBPO95073 299 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 GSRP00390 522 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 IGHV4-34P06331 123 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 AMPD1P23109 780 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 IL4RP24394 825 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 MAN1A1P33908 653 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 ARHGAP25P42331 645 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 ADPRHP54922 357 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 TAS2R40P59535 323 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 PUM1Q14671 1186 aaKnown RBP eCLIP17.02■□□□□ 0.32
SSBP4-204ENST00000597724 TCEAL1Q15170 157 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 ATP13A4Q4VNC1 1196 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 STPG1Q5TH74 334 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 AGBL4Q5VU57 503 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 KIAA0895LQ68EN5 471 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 NPWQ8N729 165 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 OR2AP1Q8NGE2 309 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 GRIN3AQ8TCU5 1115 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 RFFLQ8WZ73 363 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 SNX19Q92543 992 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 TSC1Q92574 1164 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 MIR1-1HGQ9H1L0 117 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 KDM4CQ9H3R0 1056 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 PDFQ9HBH1 243 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 ETNK2Q9NVF9 386 aa17.02■□□□□ 0.32
SSBP4-204ENST00000597724 TBC1D3DA0A087WVF3 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3IA0A087WXS9 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3EA0A087X179 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3KA0A087X1G2 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3FA6NER0 549 aaPredicted RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3LB9A6J9 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 CDX4O14627 284 aaPredicted RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 PLRG1O43660 514 aaKnown RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3HP0C7X1 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 ENGP17813 658 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 FECHP22830 423 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 CD27P26842 260 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 CCR5P51681 352 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 ARSEP51690 589 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 CDH6P55285 790 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 SNRPD1P62314 119 aaKnown RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 MESDQ14696 234 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 MYLK3Q32MK0 819 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 PIP5KL1Q5T9C9 394 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3GQ6DHY5 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3CQ6IPX1 549 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 TBC1D3Q8IZP1 549 aaPredicted RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 ZCCHC9Q8N567 271 aaKnown RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 VOPP1Q96AW1 172 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 ARRDC3Q96B67 414 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 ORAI3Q9BRQ5 295 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 RTKNQ9BST9 563 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 ZDHHC6Q9H6R6 413 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 RCOR3Q9P2K3 495 aaPredicted RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 UBA2Q9UBT2 640 aaPredicted RBP17.01■□□□□ 0.31
SSBP4-204ENST00000597724 MFHAS1Q9Y4C4 1052 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 SLCO1B1Q9Y6L6 691 aa17.01■□□□□ 0.31
SSBP4-204ENST00000597724 DNAH14Q0VDD8 3507 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 TMEM110-MUSTN1A8MSY1 372 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 DFFAO00273 331 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 ARHGAP33O14559 1287 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 BCAT2O15382 392 aaPredicted RBP17■□□□□ 0.31
SSBP4-204ENST00000597724 POP4O95707 220 aaKnown RBP17■□□□□ 0.31
SSBP4-204ENST00000597724 CD48P09326 243 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 CYLC1P35663 651 aaPredicted RBP17■□□□□ 0.31
SSBP4-204ENST00000597724 MAGEA1P43355 309 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 TAS2R38P59533 333 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 RHOAP61586 193 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 CCDC15Q0P6D6 951 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 MMRN1Q13201 1228 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 KRT81Q14533 505 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 CYTH1Q15438 398 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 ATXN7L2Q5T6C5 722 aaPredicted RBP17■□□□□ 0.31
SSBP4-204ENST00000597724 TMCO3Q6UWJ1 677 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 TMTC1Q8IUR5 882 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 TP53INP2Q8IXH6 220 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 RYBPQ8N488 228 aaPredicted RBP17■□□□□ 0.31
SSBP4-204ENST00000597724 NETO2Q8NC67 525 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 PPP1R16AQ96I34 528 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 LRIG1Q96JA1 1093 aa17■□□□□ 0.31
SSBP4-204ENST00000597724 HDAC8Q9BY41 377 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms