RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 CEP295Q9C0D2 2601 aa18.28■□□□□ 0.52
CHMP2A-203ENST00000597209 KNL1Q8NG31 2342 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 WASH4PA8MWX3 477 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 RNF103O00237 685 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 TNFSF14O43557 240 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 KDELR3O43731 214 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 GZMAP12544 262 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 MAT2AP31153 395 aaKnown RBP18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 RXRGP48443 463 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 STAT4Q14765 748 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 POLD3Q15054 466 aaPredicted RBP18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 SHBQ15464 509 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 PLEKHA7Q6IQ23 1121 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 SCYL2Q6P3W7 929 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 DCUN1D2Q6PH85 259 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 RTL3Q8N8U3 475 aaKnown RBP18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 SAP25Q8TEE9 199 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 LRIG1Q96JA1 1093 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 PARVAQ9NVD7 372 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 TOR4AQ9NXH8 423 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 TAS2R14Q9NYV8 317 aa18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 FCF1Q9Y324 198 aaKnown RBP18.27■□□□□ 0.52
CHMP2A-203ENST00000597209 COL5A1P20908 1838 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 ZSCAN5CA6NGD5 496 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 GSRP00390 522 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 ITGB7P26010 798 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 HTR7P34969 479 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 ARRB1P49407 418 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 CCNHP51946 323 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 NEK3P51956 506 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 YBEYP58557 167 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 MAMLD1Q13495 774 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 NR1I3Q14994 352 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 ASIC2Q16515 512 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 KLHL40Q2TBA0 621 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 FIGNQ5HY92 759 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 SFMBT2Q5VUG0 894 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 ZSCAN30Q86W11 494 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 HORMAD1Q86X24 394 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 PYROXD2Q8N2H3 581 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 PNPLA1Q8N8W4 532 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 TMEM145Q8NBT3 493 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 GRIN3AQ8TCU5 1115 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 CASKIN2Q8WXE0 1202 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 EPAS1Q99814 870 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 TTYH3Q9C0H2 523 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 HAUS4Q9H6D7 363 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 CABIN1Q9Y6J0 2220 aa18.26■□□□□ 0.51
CHMP2A-203ENST00000597209 A0A1W2PQU0 124 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 AP1G1O43747 822 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 ATXN1LP0C7T5 689 aaKnown RBP18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 EPHB2P29323 1055 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 DNA2P51530 1060 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 IL9RQ01113 521 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 OGDHQ02218 1023 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 ZNF284Q2VY69 593 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 SPATS2Q86XZ4 545 aaKnown RBP18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 FAM174AQ8TBP5 190 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 NOL6Q9H6R4 1146 aaKnown RBP18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 CATSPERBQ9H7T0 1116 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 HECAQ9UBI9 543 aaPredicted RBP18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 ACTL7AQ9Y615 435 aa18.25■□□□□ 0.51
CHMP2A-203ENST00000597209 EIF3CLB5ME19 914 aaKnown RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 FGF10O15520 208 aaPredicted RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 SERPINC1P01008 464 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 ITGAVP06756 1048 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 ADRB3P13945 408 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 EPHA8P29322 1005 aaPredicted RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 SNRPD1P62314 119 aaKnown RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 TMEM259Q4ZIN3 620 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 INO80DQ53TQ3 878 aaPredicted RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 PRAMEF14Q5SWL7 426 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 KIAA1161Q6NSJ0 714 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 ZNF571Q7Z3V5 609 aaPredicted RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 TMC6Q7Z403 805 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 UMODL1-AS1Q8N2C9 162 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 OR2AP1Q8NGE2 309 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 FNIP1Q8TF40 1166 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 RAB7BQ96AH8 199 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 KLHDC7BQ96G42 594 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 EIF3CQ99613 913 aaKnown RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 DONSONQ9NYP3 566 aa18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 ZFR2Q9UPR6 939 aaKnown RBP18.24■□□□□ 0.51
CHMP2A-203ENST00000597209 TMEM191CA6NGB0 347 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 PCDH8O95206 1070 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 POP4O95707 220 aaKnown RBP18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 HNRNPA2B1P22626 353 aaKnown RBP18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 AKT2P31751 481 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 TPM4P67936 248 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 KLHL30Q0D2K2 578 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 PARP15Q460N3 678 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 E4F1Q66K89 784 aaPredicted RBP18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 FBXL19Q6PCT2 694 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 CCNI2Q6ZMN8 369 aaPredicted RBP18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 TMPRSS7Q7RTY8 843 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 GATAD2AQ86YP4 633 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 VOPP1Q96AW1 172 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 FEM1CQ96JP0 617 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 OSBPL1AQ9BXW6 950 aa18.23■□□□□ 0.51
CHMP2A-203ENST00000597209 TM6SF2Q9BZW4 377 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms