RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 LHX3Q9UBR4 397 aa15.25■□□□□ 0.03
SCN1B-204ENST00000596348 UBA2Q9UBT2 640 aaPredicted RBP15.25■□□□□ 0.03
SCN1B-204ENST00000596348 TRIM10Q9UDY6 481 aa15.25■□□□□ 0.03
SCN1B-204ENST00000596348 PCDHGA5Q9Y5G8 931 aa15.25■□□□□ 0.03
SCN1B-204ENST00000596348 ALG6Q9Y672 507 aa15.25■□□□□ 0.03
SCN1B-204ENST00000596348 ATXN2Q99700 1313 aaKnown RBP15.24■□□□□ 0.03
SCN1B-204ENST00000596348 LRRD1A4D1F6 860 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 GOLGA6L3A6NEY3 463 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 BTNL10A8MVZ5 291 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 SPOPO43791 374 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 MFSD11O43934 449 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 RNASEH2AO75792 299 aaKnown RBP15.24■□□□□ 0.03
SCN1B-204ENST00000596348 TNNT1P13805 278 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 GKP32189 559 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 RECQLP46063 649 aaPredicted RBP15.24■□□□□ 0.03
SCN1B-204ENST00000596348 ZNF33AQ06730 810 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 CYTH1Q15438 398 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 PLA2G2CQ5R387 149 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 NCBP2-AS2Q69YL0 99 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 RHOT1Q8IXI2 618 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 PLPP6Q8IY26 295 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 HDDC3Q8N4P3 179 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 TMIEQ8NEW7 156 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 CASKIN2Q8WXE0 1202 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 ARRDC3Q96B67 414 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 CCDC114Q96M63 670 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 OMDQ99983 421 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 BTBD1Q9H0C5 482 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 TMEM74BQ9NUR3 256 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 IL36AQ9UHA7 158 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 IPO11Q9UI26 975 aaKnown RBP15.24■□□□□ 0.03
SCN1B-204ENST00000596348 FZD4Q9ULV1 537 aa15.24■□□□□ 0.03
SCN1B-204ENST00000596348 FARP1Q9Y4F1 1045 aaPredicted RBP15.24■□□□□ 0.03
SCN1B-204ENST00000596348 CNOT1A5YKK6 2376 aaKnown RBP15.24■□□□□ 0.03
SCN1B-204ENST00000596348 C10orf142B7Z368 130 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 C1QTNF3-AMACRE9PGA6 284 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 LEFTY1O75610 366 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 SEMA4FO95754 770 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 GSRP00390 522 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 KRT1P04264 644 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 MARCKSL1P49006 195 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 RHOAP61586 193 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 CNTN1Q12860 1018 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 PAFAH1B3Q15102 231 aaKnown RBP15.23■□□□□ 0.03
SCN1B-204ENST00000596348 ARSIQ5FYB1 569 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 ZFYVE27Q5T4F4 411 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 AGBL4Q5VU57 503 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 FAM46CQ5VWP2 391 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 TCEAL6Q6IPX3 200 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 KIAA1328Q86T90 577 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 MAP7D3Q8IWC1 876 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 CADM4Q8NFZ8 388 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 OR2AP1Q8NGE2 309 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 PIGKQ92643 395 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 TCEAL3Q969E4 200 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 HEPHQ9BQS7 1158 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 ZDHHC6Q9H6R6 413 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 SGK2Q9HBY8 427 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 SEMA4GQ9NTN9 838 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 PILRBQ9UKJ0 227 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 NCKAP1Q9Y2A7 1128 aa15.23■□□□□ 0.03
SCN1B-204ENST00000596348 METTL12A8MUP2 240 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 ZNF487B1APH4 448 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 PATE3B3GLJ2 98 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 KPNA3O00505 521 aaPredicted RBP15.22■□□□□ 0.03
SCN1B-204ENST00000596348 PSTPIP1O43586 416 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 MAFKO60675 156 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 LRP3O75074 770 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 MAP3K6O95382 1288 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 PEX11BO96011 259 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 PRNPP04156 253 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 MAOBP27338 520 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 SERPINB6P35237 376 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 RGRP47804 291 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 ADPRHP54922 357 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 SNRPD1P62314 119 aaKnown RBP15.22■□□□□ 0.03
SCN1B-204ENST00000596348 GBE1Q04446 702 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 IL10RBQ08334 325 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 SF3A2Q15428 464 aaKnown RBP15.22■□□□□ 0.03
SCN1B-204ENST00000596348 CSRP2Q16527 193 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 MYLK3Q32MK0 819 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 PIP5KL1Q5T9C9 394 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 PEAR1Q5VY43 1037 aaPredicted RBP15.22■□□□□ 0.03
SCN1B-204ENST00000596348 NCEH1Q6PIU2 408 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.22■□□□□ 0.03
SCN1B-204ENST00000596348 DAAM2Q86T65 1068 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 SYT12Q8IV01 421 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 KIAA2013Q8IYS2 634 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 RYBPQ8N488 228 aaPredicted RBP15.22■□□□□ 0.03
SCN1B-204ENST00000596348 LRRC57Q8N9N7 239 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 KRT35Q92764 455 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 FOXJ1Q92949 421 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
SCN1B-204ENST00000596348 EXOC2Q96KP1 924 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 GDAP1L1Q96MZ0 367 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 RNF157Q96PX1 679 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 PCED1AQ9H1Q7 454 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 SP110Q9HB58 689 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 ADGRG1Q9Y653 693 aa15.22■□□□□ 0.03
SCN1B-204ENST00000596348 SLCO1B1Q9Y6L6 691 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms