RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PIGHQ14442 188 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 SUZ12Q15022 739 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 HLA-BQ31612 363 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 INAVAQ3KP66 663 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 INO80DQ53TQ3 878 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 N4BP2L1Q5TBK1 243 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 SPECC1LQ69YQ0 1117 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 DPY19L3Q6ZPD9 716 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 ERN2Q76MJ5 926 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 PYROXD2Q8N2H3 581 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 GRIN3AQ8TCU5 1115 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 DHX35Q9H5Z1 703 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 AASDHPPTQ9NRN7 309 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 TM7SF3Q9NS93 570 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 NDFIP2Q9NV92 336 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 MYO1AQ9UBC5 1043 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 LCMT1Q9UIC8 334 aa18.07■□□□□ 0.48
SHKBP1-204ENST00000594862 YKT6O15498 198 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 FLRT2O43155 660 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 ZNF821O75541 412 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 CD59P13987 128 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 CD38P28907 300 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 PMLP29590 882 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 CASP14P31944 242 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 CCT8P50990 548 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 RAD51Q06609 339 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 TSR1Q2NL82 804 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 KIF19Q2TAC6 998 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 ARSIQ5FYB1 569 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 PIP5KL1Q5T9C9 394 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 IQCHQ86VS3 1027 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 NAXDQ8IW45 347 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 OXR1Q8N573 874 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 OR2AP1Q8NGE2 309 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 SERAC1Q96JX3 654 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 GDAP1L1Q96MZ0 367 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 SLC6A18Q96N87 628 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 SNRNP25Q9BV90 132 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 ZNHIT6Q9NWK9 470 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 HECAQ9UBI9 543 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 FCF1Q9Y324 198 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 PCDHB9Q9Y5E1 797 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 WASF2Q9Y6W5 498 aa18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 ASCC3Q8N3C0 2202 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-204ENST00000594862 PLXNA2O75051 1894 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 RASA4BC9J798 803 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 DAPK3O43293 454 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 RASA4O43374 803 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 BUB1O43683 1085 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 LRCH4O75427 683 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 LEFTY1O75610 366 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 IGSF6O95976 241 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 MIPP30301 263 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 CTSKP43235 329 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 HCAR3P49019 387 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 METAP1P53582 386 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 PPP2CBP62714 309 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 PPP2CAP67775 309 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 SHC2P98077 582 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 BNC1Q01954 994 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 SERINC3Q13530 473 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 ZNF423Q2M1K9 1284 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 POM121L1PQ3SYA9 428 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 BOLA3Q53S33 107 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 ALKBH5Q6P6C2 394 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 RYBPQ8N488 228 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 NIPA2Q8N8Q9 360 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 CHST14Q8NCH0 376 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 OR2I1PQ8NGU4 316 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 RAB7BQ96AH8 199 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 ARHGEF26Q96DR7 871 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 MAGEB5Q9BZ81 275 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 ZWILCHQ9H900 591 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 PCSK1NQ9UHG2 260 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 IP6K2Q9UHH9 426 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 ANGPTL2Q9UKU9 493 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 SNX11Q9Y5W9 270 aa18.05■□□□□ 0.48
SHKBP1-204ENST00000594862 CHD6Q8TD26 2715 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 ARHGAP42A6NI28 874 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 PRAMEF26H0Y7S4 382 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 AP1G1O43747 822 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 PCDHGA12O60330 932 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 TRIM16O95361 564 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 POP4O95707 220 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 CD160O95971 181 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 GRM3Q14832 879 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 KIAA1161Q6NSJ0 714 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 FBXL19Q6PCT2 694 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 RFX8Q6ZV50 586 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 LZTR1Q8N653 840 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 MFSD2AQ8NA29 543 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 OR8K1Q8NGG5 319 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 FAM174AQ8TBP5 190 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 ARRDC3Q96B67 414 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 HMCESQ96FZ2 354 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 TM6SF2Q9BZW4 377 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 NOL6Q9H6R4 1146 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 ZDHHC6Q9H6R6 413 aa18.04■□□□□ 0.48
SHKBP1-204ENST00000594862 GDF3Q9NR23 364 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms