RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 HERC6Q8IVU3 1022 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 KLHL23Q8NBE8 558 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 CLP1Q92989 425 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 FAM111AQ96PZ2 611 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 C12orf65Q9H3J6 166 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 PDFQ9HBH1 243 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 MRM3Q9HC36 420 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 C20orf96Q9NUD7 363 aaPredicted RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 SMPD4Q9NXE4 827 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 TCAF1Q9Y4C2 921 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 DENND4CQ5VZ89 1909 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 LAMA2P24043 3122 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 A0A1B0GVM2 712 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 TCAF2A6NFQ2 919 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 H3BNC9 293 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 SNX3O60493 162 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 LATS1O95835 1130 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 LRG1P02750 347 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 ADH1AP07327 375 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 RHOCP08134 193 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 SGSHP51688 502 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 SMAD3P84022 425 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 IFT88Q13099 833 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 ZNF177Q13360 481 aaPredicted RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 HSP90AA5PQ58FG0 334 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 ARMC3Q5W041 872 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 PDPK2PQ6A1A2 396 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 IL31Q6EBC2 164 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 PSRC1Q6PGN9 363 aaPredicted RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 RANBP10Q6VN20 620 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 TMC7Q7Z402 723 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 SPATA21Q7Z572 469 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 STRA8Q7Z7C7 330 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 NDUFAF2Q8N183 169 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 BBS5Q8N3I7 341 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 PGBD5Q8N414 524 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 OR7D4Q8NG98 312 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 ACMSDQ8TDX5 336 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 GRAMD1AQ96CP6 724 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 RBBP8Q99708 897 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 PITPNM3Q9BZ71 974 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 POLR1EQ9GZS1 481 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 VPS11Q9H270 941 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 NSMCE4AQ9NXX6 385 aa12.11□□□□□ -0.47
NPC1-214ENST00000593280 RRP15Q9Y3B9 282 aaKnown RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 USP15Q9Y4E8 981 aaPredicted RBP12.11□□□□□ -0.47
NPC1-214ENST00000593280 A0A0D9SEW6 157 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 ILVBLA1L0T0 632 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 CCDC78A2IDD5 438 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 WDR91A4D1P6 747 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 TPP1O14773 563 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 TSPAN3O60637 253 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 CXCL14O95715 111 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 MMP2P08253 660 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 DHRS4L1P0CG22 281 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 HOXD9P28356 352 aaPredicted RBP12.1□□□□□ -0.47
NPC1-214ENST00000593280 SPRP35270 261 aaPredicted RBP12.1□□□□□ -0.47
NPC1-214ENST00000593280 ETV4P43268 484 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 OXCT1P55809 520 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 PDE1BQ01064 536 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 SF3A3Q12874 501 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPC1-214ENST00000593280 SEPT6Q14141 434 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 TEDDM1Q5T9Z0 273 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 TXNDC8Q6A555 127 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 KDELC2Q7Z4H8 507 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 SRLQ86TD4 932 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 SETD3Q86TU7 594 aaPredicted RBP12.1□□□□□ -0.47
NPC1-214ENST00000593280 ELMOD1Q8N336 334 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 SLC25A41Q8N5S1 370 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
NPC1-214ENST00000593280 WBP2Q969T9 261 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 AGAP2Q99490 1192 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 EMILIN2Q9BXX0 1053 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 PRKD2Q9BZL6 878 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 SLC13A1Q9BZW2 595 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 ATXN3LQ9H3M9 355 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 ARNT2Q9HBZ2 717 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 ATP13A1Q9HD20 1204 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 IARS2Q9NSE4 1012 aaKnown RBP12.1□□□□□ -0.47
NPC1-214ENST00000593280 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
NPC1-214ENST00000593280 PRKAG3Q9UGI9 489 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 STOML2Q9UJZ1 356 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 PLLPQ9Y342 182 aa12.1□□□□□ -0.47
NPC1-214ENST00000593280 KDELR3O43731 214 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 OLFM2O95897 454 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 ALDOAP04075 364 aaKnown RBP12.09□□□□□ -0.47
NPC1-214ENST00000593280 C8AP07357 584 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 PAMP19021 973 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 GABRR2P28476 465 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 CRHR1P34998 444 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 CTNNB1P35222 781 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 CHRNA4P43681 627 aa12.09□□□□□ -0.47
NPC1-214ENST00000593280 SERPINB4P48594 390 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms