RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 SAAL1Q96ER3 474 aa9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 CCDC120Q96HB5 630 aa9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 FAM84AQ96KN4 292 aa9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 TEFMQ96QE5 360 aaKnown RBP9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 FAM213AQ9BRX8 229 aa9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 LRRC61Q9BV99 259 aa9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 APPL1Q9UKG1 709 aa9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 STYXL1Q9Y6J8 313 aa9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 KMT2CQ8NEZ4 4911 aaKnown RBP9.05□□□□□ -0.96
SMARCA4-218ENST00000592158 CHD3Q12873 2000 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 TRPM6Q9BX84 2022 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 PIPSLA2A3N6 862 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 CELA2BP08218 269 aaPredicted RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 KRT19P08727 400 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 TSHRP16473 764 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 POLR2BP30876 1174 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 DDIT3P35638 169 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 RBMXP38159 391 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 PNPLA4P41247 253 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 WNT7BP56706 349 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 KCNA1Q09470 495 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 PDE1CQ14123 709 aaPredicted RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 ZNF235Q14590 738 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 ZNF284Q2VY69 593 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 AGBL4Q5VU57 503 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 DUS1LQ6P1R4 473 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 CRELD2Q6UXH1 353 aaPredicted RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 KYAT3Q6YP21 454 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 ZNF720Q7Z2F6 126 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 BRAPQ7Z569 592 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 FAM129CQ86XR2 697 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 AGBL5Q8NDL9 886 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 ZSWIM2Q8NEG5 633 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 PCDH19Q8TAB3 1148 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 EPSTI1Q96J88 318 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 CCDC74BQ96LY2 380 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 ST6GALNAC4Q9H4F1 302 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 MRPL44Q9H9J2 332 aaKnown RBP9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 OCIAD1Q9NX40 245 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 TBC1D7Q9P0N9 293 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 TNFRSF10DQ9UBN6 386 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 AGAP1Q9UPQ3 857 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 SNX9Q9Y5X1 595 aa9.04□□□□□ -0.96
SMARCA4-218ENST00000592158 ANK3Q12955 4377 aaKnown RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 IGHV5-10-1A0A0J9YXX1 117 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 GOLGA8IPA6NC78 632 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 GOLGA8JA6NMD2 632 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 TTC34A8MYJ7 566 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 B4E171 279 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 SPINT1O43278 529 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 STK17BO94768 372 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 GCNT3O95395 438 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 CPNE6O95741 557 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 PDGFRBP09619 1106 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 HOXD9P28356 352 aaPredicted RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 TSPAN7P41732 249 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 GLRBP48167 497 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 SLC5A3P53794 718 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 CSNK1G2P78368 415 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 POSTNQ15063 836 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 MDH1BQ5I0G3 518 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 TPRG1LQ5T0D9 272 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 L1TD1Q5T7N2 865 aaKnown RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 XKRXQ6PP77 449 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 BRSK2Q8IWQ3 736 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 PHACTR4Q8IZ21 702 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 C1orf127Q8N9H9 656 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 WFDC11Q8NEX6 87 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 MYCBPAPQ8TBZ2 947 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 MTFMTQ96DP5 389 aaKnown RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 ACCSQ96QU6 501 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 CTRCQ99895 268 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 ZNF518BQ9C0D4 1074 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 ING2Q9H160 280 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 RBAKQ9NYW8 714 aaPredicted RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 NUDT5Q9UKK9 219 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 B3GNT3Q9Y2A9 372 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 TMEM184BQ9Y519 407 aaPredicted RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 HS3ST3A1Q9Y663 406 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
SMARCA4-218ENST00000592158 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.962e-9■■■□□ 15.7
SMARCA4-218ENST00000592158 EDDM13A0A1B0GTR0 161 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 ARGFXA6NJG6 315 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 F5H423 210 aaPredicted RBP9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 CREG1O75629 220 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 EDN3P14138 238 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 IDEP14735 1019 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 GLB1P16278 677 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 GAP43P17677 238 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 CORO1AP31146 461 aaKnown RBP9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 TXLNAP40222 546 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 THOP1P52888 689 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 TAS2R38P59533 333 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 POU5F1Q01860 360 aaKnown RBP9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 CNTN1Q12860 1018 aa9.02□□□□□ -0.97
SMARCA4-218ENST00000592158 SOWAHAQ2M3V2 549 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms