RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 IL36AQ9UHA7 158 aa18.56■□□□□ 0.56
DDX39A-212ENST00000590260 IP6K2Q9UHH9 426 aa18.56■□□□□ 0.56
DDX39A-212ENST00000590260 CACNA1AO00555 2505 aa18.56■□□□□ 0.56
DDX39A-212ENST00000590260 DOCK9Q9BZ29 2069 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 TMEM131Q92545 1883 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 MED19A0JLT2 244 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-212ENST00000590260 BCAT2O15382 392 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-212ENST00000590260 TMCC1O94876 653 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 CD48P09326 243 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 TMEM253P0C7T8 217 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 DESP17661 470 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 SDHBP21912 280 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 CD27P26842 260 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 CSNK1EP49674 416 aaKnown RBP18.55■□□□□ 0.56
DDX39A-212ENST00000590260 PAPOLAP51003 745 aaKnown RBP18.55■□□□□ 0.56
DDX39A-212ENST00000590260 NDST2P52849 883 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 GRIK2Q13002 908 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 PARP15Q460N3 678 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 ATXN7L2Q5T6C5 722 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-212ENST00000590260 FAM46CQ5VWP2 391 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 DGLUCYQ7Z3D6 616 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 DSG4Q86SJ6 1040 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 PLPP6Q8IY26 295 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 HSPH1Q92598 858 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 PCDH18Q9HCL0 1135 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.55■□□□□ 0.56
DDX39A-212ENST00000590260 SUSD2Q9UGT4 822 aa18.55■□□□□ 0.56
DDX39A-212ENST00000590260 TP53BP1Q12888 1972 aaPredicted RBP18.55■□□□□ 0.56
DDX39A-212ENST00000590260 A0A1W2PPC4 97 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 C1QTNF3-AMACRE9PGA6 284 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 KPNA3O00505 521 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-212ENST00000590260 SPINT1O43278 529 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 LATO43561 262 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 BUB1O43683 1085 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 AKR1B10O60218 316 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 WNT1P04628 370 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 H2AFZP0C0S5 128 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 AMPD1P23109 780 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 CCR5P51681 352 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 BOLA3Q53S33 107 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 H2AFVQ71UI9 128 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 MINDY1Q8N5J2 469 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 TEKT4Q8WW24 435 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 NSMCE3Q96MG7 304 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 SLC6A18Q96N87 628 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 CSPG4P5Q96PW8 444 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 NCAPGQ9BPX3 1015 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 HEPHQ9BQS7 1158 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 GTPBP2Q9BX10 602 aaKnown RBP18.54■□□□□ 0.56
DDX39A-212ENST00000590260 IL21RQ9HBE5 538 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 CTTNBP2NLQ9P2B4 639 aa18.54■□□□□ 0.56
DDX39A-212ENST00000590260 HECAQ9UBI9 543 aaPredicted RBP18.54■□□□□ 0.56
DDX39A-212ENST00000590260 A0A1B0GVT2 93 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 LRRC72A6NJI9 287 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 MYO1FO00160 1098 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 INSIG1O15503 277 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 SLC7A4O43246 635 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 PRAMEF11O60813 436 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 PROSCO94903 275 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 GSRP00390 522 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 PRNPP04156 253 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 DNA2P51530 1060 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 SFSWAPQ12872 951 aaKnown RBP18.53■□□□□ 0.56
DDX39A-212ENST00000590260 MMRN1Q13201 1228 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 CACNA1EQ15878 2313 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 PARS2Q7L3T8 475 aaKnown RBP18.53■□□□□ 0.56
DDX39A-212ENST00000590260 RABEPKQ7Z6M1 372 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 OR2AP1Q8NGE2 309 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 CTNNBL1Q8WYA6 563 aaPredicted RBP18.53■□□□□ 0.56
DDX39A-212ENST00000590260 MRFAP1L1Q96HT8 127 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 DEF6Q9H4E7 631 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 ZDHHC6Q9H6R6 413 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 ZNHIT6Q9NWK9 470 aaKnown RBP18.53■□□□□ 0.56
DDX39A-212ENST00000590260 UVRAGQ9P2Y5 699 aa18.53■□□□□ 0.56
DDX39A-212ENST00000590260 ZFR2Q9UPR6 939 aaKnown RBP18.53■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3DA0A087WVF3 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3IA0A087WXS9 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3EA0A087X179 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3KA0A087X1G2 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3FA6NER0 549 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-212ENST00000590260 ZSCAN5CA6NGD5 496 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3LB9A6J9 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 GIPC1O14908 333 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TPM1P09493 284 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3HP0C7X1 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 GNSP15586 552 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 RGRP47804 291 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 MYLK3Q32MK0 819 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 INO80DQ53TQ3 878 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3GQ6DHY5 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3CQ6IPX1 549 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 ERN2Q76MJ5 926 aaKnown RBP18.52■□□□□ 0.56
DDX39A-212ENST00000590260 ERMP1Q7Z2K6 904 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TBC1D3Q8IZP1 549 aaPredicted RBP18.52■□□□□ 0.56
DDX39A-212ENST00000590260 SLC35G2Q8TBE7 412 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 EXOC2Q96KP1 924 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 CCDC114Q96M63 670 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 CCDC42Q96M95 316 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 HDAC8Q9BY41 377 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms