RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 TRIM72Q6ZMU5 477 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 GCNT7Q6ZNI0 430 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
RFX1-207ENST00000589937 PHF13Q86YI8 300 aaPredicted RBP12.92□□□□□ -0.34
RFX1-207ENST00000589937 SLC22A18ASQ8N1D0 253 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 MFSD2AQ8NA29 543 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 TMEM145Q8NBT3 493 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 OR13H1Q8NG92 308 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 BAP1Q92560 729 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 CENPIQ92674 756 aaPredicted RBP12.92□□□□□ -0.34
RFX1-207ENST00000589937 CNDP2Q96KP4 475 aaKnown RBP12.92□□□□□ -0.34
RFX1-207ENST00000589937 ERGIC2Q96RQ1 377 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 PPP1R9BQ96SB3 815 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 NOL6Q9H6R4 1146 aaKnown RBP12.92□□□□□ -0.34
RFX1-207ENST00000589937 PREBQ9HCU5 417 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 GPATCH2LQ9NWQ4 482 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 PPARGC1AQ9UBK2 798 aaKnown RBP12.92□□□□□ -0.34
RFX1-207ENST00000589937 CACNA1GO43497 2377 aa12.92□□□□□ -0.34
RFX1-207ENST00000589937 KNTC1P50748 2209 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 ENC1O14682 589 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 RAD51BO15315 384 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 PCDH8O95206 1070 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 PRNPP04156 253 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 PLEKP08567 350 aaPredicted RBP12.91□□□□□ -0.34
RFX1-207ENST00000589937 KRT3P12035 628 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 GPD1P21695 349 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 ACADVLP49748 655 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 CLCN6P51797 869 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 GSCP56915 257 aaPredicted RBP12.91□□□□□ -0.34
RFX1-207ENST00000589937 ANO6Q4KMQ2 910 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 TMEM259Q4ZIN3 620 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 DNAJC24Q6P3W2 148 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
RFX1-207ENST00000589937 STRADAQ7RTN6 431 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 TMPRSS7Q7RTY8 843 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 HORMAD1Q86X24 394 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 PROSER1Q86XN7 944 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 C3orf20Q8ND61 904 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 TMIEQ8NEW7 156 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 ARHGEF2Q92974 986 aaKnown RBP12.91□□□□□ -0.34
RFX1-207ENST00000589937 TBC1D31Q96DN5 1066 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 AGPAT1Q99943 283 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 SELENOOQ9BVL4 669 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 TRIM7Q9C029 511 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 KDM4CQ9H3R0 1056 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 TMEM248Q9NWD8 314 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 UCKL1Q9NWZ5 548 aa12.91□□□□□ -0.34
RFX1-207ENST00000589937 BPTFQ12830 3046 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 PRAMEF26H0Y7S4 382 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 LDOC1O95751 146 aaPredicted RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 THEGLP0DJG4 465 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 MYF5P13349 255 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 ADRB3P13945 408 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 HOXB3P14651 431 aaPredicted RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 RHOQP17081 205 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 ITGB7P26010 798 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 RECQLP46063 649 aaPredicted RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 NRG1Q02297 640 aaPredicted RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 INAVAQ3KP66 663 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 ZNF542PQ5EBM4 170 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 CARD16Q5EG05 197 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 PPP1R15BQ5SWA1 713 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 TPRG1LQ5T0D9 272 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 ZNF783Q6ZMS7 281 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 PTAR1Q7Z6K3 402 aaPredicted RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 PCDH20Q8N6Y1 951 aaKnown RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 SYT11Q9BT88 431 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 HDAC8Q9BY41 377 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 CEP44Q9C0F1 390 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 OSBPL2Q9H1P3 480 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 DYRK4Q9NR20 520 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 DMTF1Q9Y222 760 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 RAXQ9Y2V3 346 aa12.9□□□□□ -0.34
RFX1-207ENST00000589937 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
RFX1-207ENST00000589937 ASXL3Q9C0F0 2248 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 POM121BA6NF01 834 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 KRIT1O00522 736 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 TRIM38O00635 465 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 FFAR2O15552 330 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 DFNA5O60443 496 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 RAMP2O60895 175 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 TMCC1O94876 653 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 CALB1P05937 261 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 UGT2B4P06133 528 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 CDK11BP21127 795 aaKnown RBP12.89□□□□□ -0.35
RFX1-207ENST00000589937 RXRGP48443 463 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 MAPKAPK2P49137 400 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 ARRB1P49407 418 aaPredicted RBP12.89□□□□□ -0.35
RFX1-207ENST00000589937 NEK3P51956 506 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
RFX1-207ENST00000589937 STAT4Q14765 748 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 SMAD1Q15797 465 aaKnown RBP12.89□□□□□ -0.35
RFX1-207ENST00000589937 ARL13BQ3SXY8 428 aa12.89□□□□□ -0.35
RFX1-207ENST00000589937 SLC45A4Q5BKX6 768 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms