RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-221ENST00000589867 C4orf47A7E2U8 309 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 J3KR12 359 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 WNT9AO14904 365 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 PLRG1O43660 514 aaKnown RBP17.62■□□□□ 0.41
MBD1-221ENST00000589867 LEFTY1O75610 366 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 TMCC1O94876 653 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 PROSCO94903 275 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CFIP05156 583 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CD48P09326 243 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 TPM1P09493 284 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 FECHP22830 423 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 AMPD1P23109 780 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CCNHP51946 323 aaPredicted RBP17.62■□□□□ 0.41
MBD1-221ENST00000589867 NDST2P52849 883 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CYTH1Q15438 398 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 DSG4Q86SJ6 1040 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 OR2T34Q8NGX1 318 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 OR6K2Q8NGY2 324 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CEP76Q8TAP6 659 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 GRIN3AQ8TCU5 1115 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CTNNBL1Q8WYA6 563 aaPredicted RBP17.62■□□□□ 0.41
MBD1-221ENST00000589867 HSPH1Q92598 858 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CCDC42Q96M95 316 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 CSPG4P5Q96PW8 444 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 DEF6Q9H4E7 631 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.62■□□□□ 0.41
MBD1-221ENST00000589867 CTTNBP2NLQ9P2B4 639 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 LHX3Q9UBR4 397 aa17.62■□□□□ 0.41
MBD1-221ENST00000589867 A0A1B0GTW7 788 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 FAM47DPA6NHR8 397 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 BUB1O43683 1085 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 PRAMEF11O60813 436 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 MTA2O94776 668 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 FSBPO95073 299 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 PAPOLAP51003 745 aaKnown RBP17.61■□□□□ 0.41
MBD1-221ENST00000589867 MMRN1Q13201 1228 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 TSR1Q2NL82 804 aaKnown RBP17.61■□□□□ 0.41
MBD1-221ENST00000589867 ATXN7L2Q5T6C5 722 aaPredicted RBP17.61■□□□□ 0.41
MBD1-221ENST00000589867 FAM46CQ5VWP2 391 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 LAYNQ6UX15 382 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 OR14C36Q8NHC7 312 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 SLC35G2Q8TBE7 412 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 HEPHQ9BQS7 1158 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 RTKNQ9BST9 563 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 NUSAP1Q9BXS6 441 aaKnown RBP17.61■□□□□ 0.41
MBD1-221ENST00000589867 MIR1-1HGQ9H1L0 117 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 IL36AQ9UHA7 158 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 TMEM131Q92545 1883 aa17.61■□□□□ 0.41
MBD1-221ENST00000589867 TP53BP1Q12888 1972 aaPredicted RBP17.6■□□□□ 0.41
MBD1-221ENST00000589867 TRPM6Q9BX84 2022 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 ZSCAN5CA6NGD5 496 aaPredicted RBP17.6■□□□□ 0.41
MBD1-221ENST00000589867 C1QTNF3-AMACRE9PGA6 284 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 ARHGAP33O14559 1287 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 BCAT2O15382 392 aaPredicted RBP17.6■□□□□ 0.41
MBD1-221ENST00000589867 SLC7A4O43246 635 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 LATO43561 262 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 GJB3O75712 270 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 LCA5LO95447 670 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 GSRP00390 522 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 CD27P26842 260 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 DNA2P51530 1060 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 CCR5P51681 352 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 ZNF135P52742 658 aaPredicted RBP17.6■□□□□ 0.41
MBD1-221ENST00000589867 GRIK2Q13002 908 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 TCEAL1Q15170 157 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 INO80DQ53TQ3 878 aaPredicted RBP17.6■□□□□ 0.41
MBD1-221ENST00000589867 OR2AP1Q8NGE2 309 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 NSMCE3Q96MG7 304 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 HDAC8Q9BY41 377 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 TM9SF3Q9HD45 589 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 HECAQ9UBI9 543 aaPredicted RBP17.6■□□□□ 0.41
MBD1-221ENST00000589867 HPCAL4Q9UM19 191 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 TFR2Q9UP52 801 aa17.6■□□□□ 0.41
MBD1-221ENST00000589867 A0A1W2PPC4 97 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 LRRC72A6NJI9 287 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 H3BRJ5 948 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 KPNA3O00505 521 aaPredicted RBP17.59■□□□□ 0.41
MBD1-221ENST00000589867 INSIG1O15503 277 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 SPINT1O43278 529 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 PEX11BO96011 259 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 PRNPP04156 253 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 WNT1P04628 370 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 MAPK8P45983 427 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 RGRP47804 291 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 GEMIN4P57678 1058 aaKnown RBP17.59■□□□□ 0.41
MBD1-221ENST00000589867 SFSWAPQ12872 951 aaKnown RBP17.59■□□□□ 0.41
MBD1-221ENST00000589867 MYLK3Q32MK0 819 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 SNX19Q92543 992 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 CCDC114Q96M63 670 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 SLC6A18Q96N87 628 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 KDM4CQ9H3R0 1056 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 TMEM9BQ9NQ34 198 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 SUSD2Q9UGT4 822 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 INTUQ9ULD6 942 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 FARP1Q9Y4F1 1045 aaPredicted RBP17.59■□□□□ 0.41
MBD1-221ENST00000589867 SHROOM3Q8TF72 1996 aa17.59■□□□□ 0.41
MBD1-221ENST00000589867 DAPK3O43293 454 aa17.58■□□□□ 0.4
MBD1-221ENST00000589867 SDHBP21912 280 aa17.58■□□□□ 0.4
MBD1-221ENST00000589867 MAN1A1P33908 653 aa17.58■□□□□ 0.4
MBD1-221ENST00000589867 RECQLP46063 649 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms