RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 AP1M1Q9BXS5 423 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 DLGAP2Q9P1A6 1054 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 ZNF148Q9UQR1 794 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 ATP8A1Q9Y2Q0 1164 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 FCF1Q9Y324 198 aaKnown RBP12.37□□□□□ -0.43
DNMT1-218ENST00000589294 ACTL7AQ9Y615 435 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 TECTAO75443 2155 aa12.37□□□□□ -0.43
DNMT1-218ENST00000589294 C5orf60A6NFR6 353 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 CCDC188H7C350 402 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 SGK1O00141 431 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 PDE2AO00408 941 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-218ENST00000589294 ALOX15BO15296 676 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 KCNN4O15554 427 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 NEBLO76041 1014 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 POP4O95707 220 aaKnown RBP12.36□□□□□ -0.43
DNMT1-218ENST00000589294 PDGFBP01127 241 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-218ENST00000589294 EPHX1P07099 455 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 C7P10643 843 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 VAV1P15498 845 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 PRKCHP24723 683 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 PTPN3P26045 913 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 CHRNA3P32297 505 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 MAPK8P45983 427 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 DGKEP52429 567 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 RHOAP61586 193 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 RAD51Q06609 339 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 WASHC5Q12768 1159 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 CAMK2GQ13555 558 aaPredicted RBP12.36□□□□□ -0.43
DNMT1-218ENST00000589294 SNX1Q13596 522 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 GAS6Q14393 721 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 ZNF235Q14590 738 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 STARD3Q14849 445 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 WHAMMP3Q1A5X7 153 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 MYLK3Q32MK0 819 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 CWF19L1Q69YN2 538 aaKnown RBP12.36□□□□□ -0.43
DNMT1-218ENST00000589294 C22orf39Q6P5X5 142 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 Q6ZS52 159 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 TSEN2Q8NCE0 465 aaKnown RBP12.36□□□□□ -0.43
DNMT1-218ENST00000589294 OR2AP1Q8NGE2 309 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 OR2A12Q8NGT7 310 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 LRRN4Q8WUT4 740 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 RTP4Q96DX8 246 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 LRIG1Q96JA1 1093 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 TEKT5Q96M29 485 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 EPHX3Q9H6B9 360 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 PRSS16Q9NQE7 514 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 LHX3Q9UBR4 397 aa12.36□□□□□ -0.43
DNMT1-218ENST00000589294 MYO18AQ92614 2054 aaKnown RBP12.36□□□□□ -0.43
DNMT1-218ENST00000589294 A0A1W2PQF6 199 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 RNF103O00237 685 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 ZBTB24O43167 697 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 PI15O43692 258 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 PHF2O75151 1096 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 SIN3BO75182 1162 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 GCATO75600 419 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 IGSF6O95976 241 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 DCNP07585 359 aaKnown RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 HLA-EP13747 358 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 HOXB2P14652 356 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 COILP38432 576 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 WASP42768 502 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 FNTAP49354 379 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 CKAP4Q07065 602 aaKnown RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 ELAVL3Q14576 367 aaKnown RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 GRM3Q14832 879 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 CRY1Q16526 586 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 ALG1LQ6GMV1 187 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 C4orf22Q6V702 233 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 B4GALNT4Q76KP1 1039 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 PID1Q7Z2X4 250 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 ZNF572Q7Z3I7 529 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 DSG4Q86SJ6 1040 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 SRLQ86TD4 932 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 FBXL6Q8N531 539 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 CNTD1Q8N815 330 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 FAM71DQ8N9W8 422 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 TMIEQ8NEW7 156 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 GDAP1L1Q96MZ0 367 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 RUNDC3BQ96NL0 473 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 NUDCD1Q96RS6 583 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 FAM129BQ96TA1 746 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 MGME1Q9BQP7 344 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 TMEM121Q9BTD3 319 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 CPEB1Q9BZB8 566 aaKnown RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 POLR1EQ9GZS1 481 aaKnown RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 TNKS2Q9H2K2 1166 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 C10orf88Q9H8K7 445 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 POLMQ9NP87 494 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 NT5MQ9NPB1 228 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 SMARCAL1Q9NZC9 954 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 SEPT10Q9P0V9 454 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 HECAQ9UBI9 543 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-218ENST00000589294 MRFAP1Q9Y605 127 aa12.35□□□□□ -0.43
DNMT1-218ENST00000589294 NYNRINQ9P2P1 1898 aaKnown RBP12.34□□□□□ -0.43
DNMT1-218ENST00000589294 GPR37L1O60883 481 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 OPHN1O60890 802 aa12.34□□□□□ -0.43
DNMT1-218ENST00000589294 RNASEH1O60930 286 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms