RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TFAP2BQ92481 460 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 GLMNQ92990 594 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 NAT6Q93015 286 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 BTN2A3PQ96KV6 586 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 CCDC3Q9BQI4 270 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 FANCLQ9NW38 375 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 IPO11Q9UI26 975 aaKnown RBP8.76□□□□□ -1.01
SDF2-204ENST00000587338 SALL4Q9UJQ4 1053 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 VPS28Q9UK41 221 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 FARP1Q9Y4F1 1045 aaPredicted RBP8.76□□□□□ -1.01
SDF2-204ENST00000587338 PCDHGA7Q9Y5G6 932 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 CSNK1G3Q9Y6M4 447 aa8.76□□□□□ -1.01
SDF2-204ENST00000587338 TCAF2A6NFQ2 919 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 RIOK3O14730 519 aaKnown RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 NOBOXO60393 691 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 SERPINC1P01008 464 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 LIPCP11150 499 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 HGFP14210 728 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 CHRNA3P32297 505 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 UGT1A5P35504 534 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 PLK1P53350 603 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 OXCT1P55809 520 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 CYP4F2P78329 520 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 CENPCQ03188 943 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 CCDC15Q0P6D6 951 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 LRMPQ12912 555 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 ADAM9Q13443 819 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 NCAPHQ15003 741 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 NFIL3Q16649 462 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 TBR1Q16650 682 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 TMEM259Q4ZIN3 620 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 DCAF17Q5H9S7 520 aaPredicted RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 MANEAQ5SRI9 462 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 TTC39BQ5VTQ0 682 aaPredicted RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 SYPL2Q5VXT5 272 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 ANKRD40Q6AI12 368 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 TMEM270Q6UE05 265 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 ERN2Q76MJ5 926 aaKnown RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 RAB11FIP2Q7L804 512 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 PTRH1Q86Y79 214 aaKnown RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 RBFAQ8N0V3 343 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 FBXO39Q8N4B4 442 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 SH2D3CQ8N5H7 860 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 ATP6V0D2Q8N8Y2 350 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 WDR48Q8TAF3 677 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 FAM174AQ8TBP5 190 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 LIN37Q96GY3 246 aaPredicted RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 PPP1R13BQ96KQ4 1090 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 BMFQ96LC9 184 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 CCDC114Q96M63 670 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 PPP1R9BQ96SB3 815 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 SEMA3CQ99985 751 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 FOXP3Q9BZS1 431 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 TRIM5Q9C035 493 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 SLC25A18Q9H1K4 315 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 GPR27Q9NS67 375 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 SAMSN1Q9NSI8 373 aaKnown RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 SEPT10Q9P0V9 454 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 PISDQ9UG56 409 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 APOBEC3BQ9UH17 382 aaKnown RBP8.75□□□□□ -1.01
SDF2-204ENST00000587338 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 KIAA1257Q9ULG3 409 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 ITPR2Q14571 2701 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 NBPF19A0A087WUL8 3843 aa8.75□□□□□ -1.01
SDF2-204ENST00000587338 ANKRD17O75179 2603 aaKnown RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 SYNJ2BP-COX16A0A087WUM0 186 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 KCNU1A8MYU2 1149 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 RNF103O00237 685 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 AGRPO00253 132 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 TPP1O14773 563 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 RAD51BO15315 384 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 SART1O43290 800 aaKnown RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 FGFR1OPO95684 399 aaKnown RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 PAK4O96013 591 aaPredicted RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 CALCAP01258 141 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 PRNPP04156 253 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 JMJD7P0C870 316 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 CR2P20023 1033 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 BRD2P25440 801 aaKnown RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 RABIFP47224 123 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 VASPP50552 380 aaPredicted RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 PMS1P54277 932 aaKnown RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 ADKP55263 362 aaKnown RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 EIF3IQ13347 325 aaKnown RBP8.74□□□□□ -1.01
SDF2-204ENST00000587338 C1orf61Q13536 156 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 FGL2Q14314 439 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 CLCA4Q14CN2 919 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 CBWD6Q4V339 395 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 C4orf17Q53FE4 359 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 COBLL1Q53SF7 1204 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 PRRT3Q5FWE3 981 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 CBWD3Q5JTY5 395 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 CBWD5Q5RIA9 395 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 TPRG1LQ5T0D9 272 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 TCERG1LQ5VWI1 586 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 DRC7Q8IY82 874 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 ATP11CQ8NB49 1132 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 ZSCAN1Q8NBB4 408 aa8.74□□□□□ -1.01
SDF2-204ENST00000587338 CHST14Q8NCH0 376 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms