RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 VSIG1Q86XK7 387 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 XYLT1Q86Y38 959 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 GATAD2AQ86YP4 633 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 CCDC50Q8IVM0 306 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 PIP4K2CQ8TBX8 421 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 ALG3Q92685 438 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 PRCCQ92733 491 aaPredicted RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 KRT35Q92764 455 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 SLCO2A1Q92959 643 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 CPXM1Q96SM3 734 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 TBCBQ99426 244 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 HNRNPABQ99729 332 aaKnown RBP8.04□□□□□ -1.12
VMP1-204ENST00000587259 CNPY3Q9BT09 278 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 LRRC1Q9BTT6 524 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 TSPYL1Q9H0U9 437 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 GDF3Q9NR23 364 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 ST7Q9NRC1 585 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 ELOVL2Q9NXB9 296 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 TMEM131Q92545 1883 aa8.04□□□□□ -1.12
VMP1-204ENST00000587259 SLC12A8A0AV02 714 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 PLK4O00444 970 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 GFRA2O00451 464 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 MSI1O43347 362 aaKnown RBP8.03□□□□□ -1.12
VMP1-204ENST00000587259 FBXO21O94952 628 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 CER1O95813 267 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 GLI1P08151 1106 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 ACADMP11310 421 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 GPD1P21695 349 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SSR1P43307 286 aaKnown RBP8.03□□□□□ -1.12
VMP1-204ENST00000587259 RPL34P49207 117 aaKnown RBP8.03□□□□□ -1.12
VMP1-204ENST00000587259 ZNF143P52747 638 aaPredicted RBP8.03□□□□□ -1.12
VMP1-204ENST00000587259 DRG2P55039 364 aaKnown RBP8.03□□□□□ -1.12
VMP1-204ENST00000587259 ENPP2Q13822 863 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 FNDC3BQ53EP0 1204 aaKnown RBP8.03□□□□□ -1.12
VMP1-204ENST00000587259 HSP90B2PQ58FF3 399 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 EFHC1Q5JVL4 640 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 ZFYVE27Q5T4F4 411 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SERPINA13PQ6UXR4 307 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SLC26A9Q7LBE3 791 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 ANKS1BQ7Z6G8 1248 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 GLRX5Q86SX6 157 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 TMEM110Q86TL2 294 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 KLHL7Q8IXQ5 586 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 KRT222Q8N1A0 295 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 WDTC1Q8N5D0 677 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 BBOF1Q8ND07 529 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 CADM4Q8NFZ8 388 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 WFDC5Q8TCV5 224 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 DDI1Q8WTU0 396 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SLC35F5Q8WV83 523 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SEC14L1Q92503 715 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 CAVIN3Q969G5 261 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 BIRC7Q96CA5 298 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 LRRC45Q96CN5 670 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 BTBD6Q96KE9 485 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 LRRC19Q9H756 370 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 CAAP1Q9H8G2 361 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 METTL5Q9NRN9 209 aaKnown RBP8.03□□□□□ -1.12
VMP1-204ENST00000587259 COMMD8Q9NX08 183 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 OGFRQ9NZT2 677 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SERGEFQ9UGK8 458 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SFMBT1Q9UHJ3 866 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 ANKRD6Q9Y2G4 727 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 SLC27A6Q9Y2P4 619 aa8.03□□□□□ -1.12
VMP1-204ENST00000587259 CABIN1Q9Y6J0 2220 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 GOLGA6L7A0A1B0GV03 622 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 FAM47DPA6NHR8 397 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 ZNF487B1APH4 448 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 E5RJQ4 531 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 GOLGA8SH3BPF8 625 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 PIK3R2O00459 728 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 WNT9AO14904 365 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 RAD51CO43502 376 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 HSF2BPO75031 334 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 C1QL1O75973 258 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 DKK1O94907 266 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 ECEL1O95672 775 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 CALCAP01258 141 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 KRT1P04264 644 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 PYGMP11217 842 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 HOXD9P28356 352 aaPredicted RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 HLA-FP30511 346 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 SDC4P31431 198 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 PTPN9P43378 593 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 TNNT3P45378 269 aaPredicted RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 RNASE9P60153 205 aaKnown RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 RPL7AP62424 266 aaKnown RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 SLC6A3Q01959 620 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 GUCY2DQ02846 1103 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 CAV1Q03135 178 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 DNAJC3Q13217 504 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 ZNF211Q13398 564 aaPredicted RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 CASP8Q14790 479 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 TFDP3Q5H9I0 405 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 OR6B2Q6IFH4 312 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 RFWD3Q6PCD5 774 aa8.02□□□□□ -1.13
VMP1-204ENST00000587259 DRICH1Q6PGQ1 229 aaPredicted RBP8.02□□□□□ -1.13
VMP1-204ENST00000587259 CCDC137Q6PK04 289 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms