RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 TCEAL2Q9H3H9 227 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-225ENST00000586385 SATB2Q9UPW6 733 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 ENTPD2Q9Y5L3 495 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 FADS3Q9Y5Q0 445 aa12.14□□□□□ -0.47
BRCA1-225ENST00000586385 BIN1O00499 593 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 PAK4O96013 591 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-225ENST00000586385 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-225ENST00000586385 ADRB3P13945 408 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 NOS2P35228 1153 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 USP8P40818 1118 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 ABL2P42684 1182 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 CLCN6P51797 869 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 UCNP55089 124 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 KRT83P78385 493 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 ARF5P84085 180 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 SLC6A3Q01959 620 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 VAC14Q08AM6 782 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 EIF2B5Q13144 721 aaKnown RBP12.13□□□□□ -0.47
BRCA1-225ENST00000586385 ARHGAP44Q17R89 818 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 C3orf38Q5JPI3 329 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 PERM1Q5SV97 790 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 ENOSF1Q7L5Y1 443 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-225ENST00000586385 ELOA2Q8IYF1 753 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-225ENST00000586385 SLC46A1Q96NT5 459 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 C1QTNF2Q9BXJ5 285 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 SLC17A9Q9BYT1 436 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 USP29Q9HBJ7 922 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 SIX2Q9NPC8 291 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 PLCB1Q9NQ66 1216 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 IL36AQ9UHA7 158 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 GGT7Q9UJ14 662 aa12.13□□□□□ -0.47
BRCA1-225ENST00000586385 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 CPED1A4D0V7 1026 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 EME2A4GXA9 379 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 NEMP2A6NFY4 417 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 GCATO75600 419 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 GNA14O95837 355 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 ALPPL2P10696 532 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 ITGB7P26010 798 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 CLCN1P35523 988 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 PPP1R2P41236 205 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 SERPINH1P50454 418 aaKnown RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 NEK3P51956 506 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 PFN3P60673 137 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 HNRNPKP61978 463 aaKnown RBP eCLIP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 RPS21P63220 83 aaKnown RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 DEFB133Q30KQ1 61 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 HS1BP3Q53T59 392 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 BRMS1LQ5PSV4 323 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 KIAA1614Q5VZ46 1190 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 DPY19L2P1Q6NXN4 242 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 ZCCHC8Q6NZY4 707 aaKnown RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 CRTC1Q6UUV9 634 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 EFL1Q7Z2Z2 1120 aaKnown RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 BNIPLQ7Z465 357 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 SLC47A2Q86VL8 602 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 PARGQ86W56 976 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 RBFAQ8N0V3 343 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 PGAP3Q96FM1 320 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 TBCBQ99426 244 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 DUSP23Q9BVJ7 150 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 DPH1Q9BZG8 443 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 WDCPQ9H6R7 721 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 DYRK4Q9NR20 520 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 THSD1Q9NS62 852 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 ITM2BQ9Y287 266 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-225ENST00000586385 CSNK1G3Q9Y6M4 447 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 MAST4O15021 2626 aa12.12□□□□□ -0.47
BRCA1-225ENST00000586385 MYO18BQ8IUG5 2567 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 TDRD6O60522 2096 aaKnown RBP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 FAM170AA1A519 330 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 IGLON5A6NGN9 336 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 B8ZZF3 427 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 K7ENP7 123 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 EFSO43281 561 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 AQP9O43315 295 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 AP1G1O43747 822 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 C6P13671 934 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 PON1P27169 355 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 L1CAMP32004 1257 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 GKP32189 559 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 DUSP3P51452 185 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 CCNHP51946 323 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 PAK1Q13153 545 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 MTA1Q13330 715 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 PDE1CQ14123 709 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 RAB6CQ53S08 254 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 BROXQ5VW32 411 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 KIAA1161Q6NSJ0 714 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 INO80CQ6PI98 192 aaPredicted RBP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 DCP2Q8IU60 420 aaKnown RBP12.11□□□□□ -0.47
BRCA1-225ENST00000586385 SLC35F3Q8IY50 421 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 FAM174AQ8TBP5 190 aa12.11□□□□□ -0.47
BRCA1-225ENST00000586385 C1orf74Q96LT6 269 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms