RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLCO3A1Q9UIG8 710 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 TPX2Q9ULW0 747 aaKnown RBP11.42□□□□□ -0.58
CCDC47-206ENST00000584112 HS3ST4Q9Y661 456 aa11.42□□□□□ -0.58
CCDC47-206ENST00000584112 ANKRD36A6QL64 1941 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 A0A1W2PP55 124 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 RNASEH2AO75792 299 aaKnown RBP11.41□□□□□ -0.58
CCDC47-206ENST00000584112 C5AR1P21730 350 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 MZF1P28698 734 aaPredicted RBP11.41□□□□□ -0.58
CCDC47-206ENST00000584112 SLC8A1P32418 973 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 CASRP41180 1078 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 UQCRFS1P47985 274 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 PSMD8P48556 350 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 CXCR3P49682 368 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 STK19P49842 368 aaPredicted RBP11.41□□□□□ -0.58
CCDC47-206ENST00000584112 CDH4P55283 916 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 CENPCQ03188 943 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 DEUP1Q05D60 604 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 SLC25A52Q3SY17 297 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 C5orf22Q49AR2 442 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 FKBP15Q5T1M5 1219 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 CDKAL1Q5VV42 579 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 TAF3Q5VWG9 929 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 KIAA0895LQ68EN5 471 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 LRRC31Q6UY01 552 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 USP53Q70EK8 1073 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 ADAT2Q7Z6V5 191 aaKnown RBP11.41□□□□□ -0.58
CCDC47-206ENST00000584112 XYLT1Q86Y38 959 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 CACTIN-AS1Q8N1I8 211 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 EID2Q8N6I1 236 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 ANKRD20A12PQ8NF67 263 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 OR2T34Q8NGX1 318 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 SSC4DQ8WTU2 575 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 RFFLQ8WZ73 363 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 PTPRN2Q92932 1015 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 IGSF8Q969P0 613 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 NT5C3BQ969T7 300 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 SKA1Q96BD8 255 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 SPAG5Q96R06 1193 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 FEM1AQ9BSK4 669 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 TKTL2Q9H0I9 626 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 SIK2Q9H0K1 926 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 VPS16Q9H269 839 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 TM9SF3Q9HD45 589 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 THSD1Q9NS62 852 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 PIGVQ9NUD9 493 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 ARHGEF38Q9NXL2 777 aa11.41□□□□□ -0.58
CCDC47-206ENST00000584112 FAM47DPA6NHR8 397 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 USP12O75317 370 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 IL1BP01584 269 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 MMEP08473 750 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 GOT1P17174 413 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 LSSP48449 732 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 GALCP54803 685 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 RACK1P63244 317 aaKnown RBP11.4□□□□□ -0.58
CCDC47-206ENST00000584112 NOMO3P69849 1222 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 SKOR1P84550 965 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 KRT31Q15323 416 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 TBR1Q16650 682 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 OTUD1Q5VV17 481 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-206ENST00000584112 NCEH1Q6PIU2 408 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 SASS6Q6UVJ0 657 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 RBM43Q6ZSC3 357 aaKnown RBP11.4□□□□□ -0.58
CCDC47-206ENST00000584112 ARCQ7LC44 396 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 NOP9Q86U38 636 aaKnown RBP11.4□□□□□ -0.58
CCDC47-206ENST00000584112 LSMEM2Q8N112 164 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 STK40Q8N2I9 435 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 OR8D1Q8WZ84 308 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 CCNL2Q96S94 520 aaPredicted RBP11.4□□□□□ -0.58
CCDC47-206ENST00000584112 FAM129BQ96TA1 746 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 MUC3BQ9H195 1237 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 NEUROG2Q9H2A3 272 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 GANQ9H2C0 597 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 ANO10Q9NW15 660 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 VPS28Q9UK41 221 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 TBC1D30Q9Y2I9 924 aa11.4□□□□□ -0.58
CCDC47-206ENST00000584112 A0A1W2PPC4 97 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 GOLGA8SH3BPF8 625 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 ALOX15BO15296 676 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 ATP9BO43861 1147 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 DFNA5O60443 496 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 GFPT2O94808 682 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 ADCY5O95622 1261 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 CLDN1O95832 211 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 IGHV4-34P06331 123 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 RHOCP08134 193 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 HOXB4P17483 251 aaPredicted RBP11.39□□□□□ -0.59
CCDC47-206ENST00000584112 SOX5P35711 763 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 GGCXP38435 758 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 CCR5P51681 352 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 C21orf59P57076 290 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 KRT83P78385 493 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 ACCSLQ4AC99 568 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 FAM46CQ5VWP2 391 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 NAA35Q5VZE5 725 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 TRIM72Q6ZMU5 477 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 C14orf80Q86SX3 495 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 SETD3Q86TU7 594 aaPredicted RBP11.39□□□□□ -0.59
CCDC47-206ENST00000584112 AADATQ8N5Z0 425 aa11.39□□□□□ -0.59
CCDC47-206ENST00000584112 OR14C36Q8NHC7 312 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms