RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 P2RY11Q96G91 374 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 ZIM3Q96PE6 472 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 ZYG11BQ9C0D3 744 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 SIK2Q9H0K1 926 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 C10orf88Q9H8K7 445 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 BRD9Q9H8M2 597 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 ZNF212Q9UDV6 495 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 ATP8A1Q9Y2Q0 1164 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 MFHAS1Q9Y4C4 1052 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 KALRNO60229 2985 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 CELSR3Q9NYQ7 3312 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 RIPK2O43353 540 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 CACNG3O60359 315 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 ACSL4O60488 711 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 TCEA3O75764 348 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 RPP40O75818 363 aaKnown RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 TTC4O95801 387 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 PRB1P04280 392 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 ABHD2P08910 425 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 VAV1P15498 845 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 CHKAP35790 457 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 SLC11A2P49281 568 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 HARS2P49590 506 aaKnown RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 VPS41P49754 854 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 YBEYP58557 167 aaPredicted RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 TNK2Q07912 1038 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 GRM2Q14416 872 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 PPM1LQ5SGD2 360 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 ANKRD20A2Q5SQ80 823 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 ANKRD20A1Q5TYW2 823 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 ANKRD20A3Q5VUR7 823 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 FBXL22Q6P050 247 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 CENPUQ71F23 418 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 MIB1Q86YT6 1006 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 TMC8Q8IU68 726 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 NPWQ8N729 165 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 LEMD2Q8NC56 503 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 EXOC4Q96A65 974 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 ZC3H10Q96K80 434 aaKnown RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 TTC25Q96NG3 672 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 RBM15Q96T37 977 aaKnown RBP eCLIP12.19□□□□□ -0.46
GGA3-217ENST00000583667 LGMNQ99538 433 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 DDX50Q9BQ39 737 aaKnown RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 ROPN1BQ9BZX4 212 aaPredicted RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 ROPN1Q9HAT0 212 aaPredicted RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 ZNF334Q9HCZ1 680 aaPredicted RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 EIF2B3Q9NR50 452 aaKnown RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 HCFC1R1Q9NWW0 138 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 XPO7Q9UIA9 1087 aaKnown RBP12.19□□□□□ -0.46
GGA3-217ENST00000583667 SNX10Q9Y5X0 201 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 PIAS3Q9Y6X2 628 aa12.19□□□□□ -0.46
GGA3-217ENST00000583667 LRG1P02750 347 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 C8AP07357 584 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 MLNP12872 115 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 CDC25CP30307 473 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 GGCXP38435 758 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 MAGEA4P43358 317 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 IFNAR2P48551 515 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 MAPKAPK2P49137 400 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 IFI35P80217 286 aaPredicted RBP12.18□□□□□ -0.46
GGA3-217ENST00000583667 SLC7A9P82251 487 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 TEX44Q53QW1 395 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 HSP90B2PQ58FF3 399 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 Q6ZS52 159 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 CCDC13Q8IYE1 715 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 DEFB124Q8NES8 71 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 MAML1Q92585 1016 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 LRRC39Q96DD0 335 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 LRIG1Q96JA1 1093 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 PPP1R2P1Q96PQ5 205 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 TRMT61BQ9BVS5 477 aaKnown RBP12.18□□□□□ -0.46
GGA3-217ENST00000583667 RNF38Q9H0F5 515 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 CDC42EP4Q9H3Q1 356 aaKnown RBP12.18□□□□□ -0.46
GGA3-217ENST00000583667 ETNK1Q9HBU6 452 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 TRPV5Q9NQA5 729 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 RAB6BQ9NRW1 208 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 GDE1Q9NZC3 331 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 ZMYM5Q9UJ78 669 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 PLAAQ9Y263 795 aa12.18□□□□□ -0.46
GGA3-217ENST00000583667 TICRRQ7Z2Z1 1910 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 LNP1A1A4G5 178 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 ERI2A8K979 691 aaKnown RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 GOLGA8KD6RF30 607 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 RNF103O00237 685 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 GFRA2O00451 464 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 MATN3O15232 486 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 RRP9O43818 475 aaKnown RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 GREM1O60565 184 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 MAFKO60675 156 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 XYLBO75191 536 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 STC2O76061 302 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 METTL18O95568 372 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 MOCS2O96007 188 aaPredicted RBP12.17□□□□□ -0.46
GGA3-217ENST00000583667 PLA2G2AP14555 144 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 TACR2P21452 398 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 FCARP24071 287 aa12.17□□□□□ -0.46
GGA3-217ENST00000583667 PTPN3P26045 913 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms