RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 PCDH18Q9HCL0 1135 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 PIGVQ9NUD9 493 aa18.32■□□□□ 0.52
SNX11-212ENST00000583320 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNX11-212ENST00000583320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNX11-212ENST00000583320 WSB2Q9NYS7 404 aaPredicted RBP18.32■□□□□ 0.52
SNX11-212ENST00000583320 NEDD8-MDP1E9PL57 170 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 CACNG3O60359 315 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 ZNF883P0CG24 379 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 PLA2G2AP14555 144 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 TUBP50607 506 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 CDH6P55285 790 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 NME3Q13232 169 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 MTA1Q13330 715 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 KRT81Q14533 505 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 SIX1Q15475 284 aaPredicted RBP18.31■□□□□ 0.52
SNX11-212ENST00000583320 TEX35Q5T0J7 233 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 KLHDC10Q6PID8 442 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 DBX2Q6ZNG2 339 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 FAM131BQ86XD5 332 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 NOA1Q8NC60 698 aaKnown RBP18.31■□□□□ 0.52
SNX11-212ENST00000583320 FAF2Q96CS3 445 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 FRMD8P1Q9BZ68 369 aaPredicted RBP18.31■□□□□ 0.52
SNX11-212ENST00000583320 KLHL11Q9NVR0 708 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 OSER1Q9NX31 292 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 USP36Q9P275 1121 aaKnown RBP18.31■□□□□ 0.52
SNX11-212ENST00000583320 AP4E1Q9UPM8 1137 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 TMEM131Q92545 1883 aa18.31■□□□□ 0.52
SNX11-212ENST00000583320 UQCRHLA0A096LP55 91 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 ZBTB24O43167 697 aaPredicted RBP18.3■□□□□ 0.52
SNX11-212ENST00000583320 PHF2O75151 1096 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 UQCRHP07919 91 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 SLC2A3P11169 496 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 L1CAMP32004 1257 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 CHRNA3P32297 505 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 ABCG1P45844 678 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 TFDP2Q14188 446 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 DPYSL3Q14195 570 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 FUT11Q495W5 492 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 EFHC2Q5JST6 749 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 HECTD3Q5T447 861 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 SDE2Q6IQ49 451 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 BBS12Q6ZW61 710 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 CCDC185Q8N715 623 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 PRELID2Q8N945 189 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 C1orf216Q8TAB5 229 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 RHBDD1Q8TEB9 315 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 TSC1Q92574 1164 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 AP1M1Q9BXS5 423 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 MKRN2Q9H000 416 aaKnown RBP18.3■□□□□ 0.52
SNX11-212ENST00000583320 WDCPQ9H6R7 721 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 ARHGEF38Q9NXL2 777 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 TLR6Q9Y2C9 796 aa18.3■□□□□ 0.52
SNX11-212ENST00000583320 A0A1B0GVT2 93 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 ATXN7O15265 892 aaPredicted RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 CER1O95813 267 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 TUBBP07437 444 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 TYRP14679 529 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 CCR1P32246 355 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 FNTAP49354 379 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 TRIP4Q15650 581 aaPredicted RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 PREPLQ4J6C6 727 aaPredicted RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 ZC3H12AQ5D1E8 599 aaKnown RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 ACBD5Q5T8D3 534 aaPredicted RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 ANKS1BQ7Z6G8 1248 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 TTC13Q8NBP0 860 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 SLC39A13Q96H72 371 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 RNF157Q96PX1 679 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 HAPLN3Q96S86 360 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 HERPUD2Q9BSE4 406 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 BBS2Q9BXC9 721 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 MAK16Q9BXY0 300 aaKnown RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 OSBPL2Q9H1P3 480 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 DHX35Q9H5Z1 703 aaKnown RBP18.29■□□□□ 0.52
SNX11-212ENST00000583320 LRRC19Q9H756 370 aa18.29■□□□□ 0.52
SNX11-212ENST00000583320 NUMA1Q14980 2115 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 TCRBV7S2A1N4TA0A589 114 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 TARSL2A2RTX5 802 aaKnown RBP18.28■□□□□ 0.52
SNX11-212ENST00000583320 FLRT2O43155 660 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 CISD3P0C7P0 127 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 IL4RP24394 825 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 HTR7P34969 479 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 HCAR3P49019 387 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 CLDN6P56747 220 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 SMAD1Q15797 465 aaKnown RBP18.28■□□□□ 0.52
SNX11-212ENST00000583320 CCNG2Q16589 344 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 CA9Q16790 459 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 ERCC6LQ2NKX8 1250 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 CCDC157Q569K6 752 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 DRICH1Q6PGQ1 229 aaPredicted RBP18.28■□□□□ 0.52
SNX11-212ENST00000583320 TPGS1Q6ZTW0 290 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 NUDT18Q6ZVK8 323 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 GALNT15Q8N3T1 639 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 BHMTQ93088 406 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 KCTD15Q96SI1 283 aaPredicted RBP18.28■□□□□ 0.52
SNX11-212ENST00000583320 CDC6Q99741 560 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 HEMGNQ9BXL5 484 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 CALN1Q9BXU9 219 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 PRORYQ9H606 182 aa18.28■□□□□ 0.52
SNX11-212ENST00000583320 GPATCH2LQ9NWQ4 482 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms