RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MAGEH1Q9H213 219 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 POMKQ9H5K3 350 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 NT5MQ9NPB1 228 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 UBP1Q9NZI7 540 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 ZNF510Q9Y2H8 683 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SH3BP1Q9Y3L3 701 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 HCN4Q9Y3Q4 1203 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 IGLV3-10A0A075B6K4 115 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 TRAV19A0A0A6YYK7 116 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 GOLGA6L7A0A1B0GV03 622 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 PRR33A8MZF0 331 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 TGM5O43548 720 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 SPAG7O75391 227 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 PMPCBO75439 489 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 SUN1O94901 812 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ZWINTO95229 277 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 IGLV3-27P01718 113 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 RHOCP08134 193 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 MYL4P12829 197 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 HMGA1P17096 107 aaKnown RBP9.44□□□□□ -0.9
SS18-220ENST00000582092 PAMP19021 973 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 GABRR2P28476 465 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 CDC25CP30307 473 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 CORO1AP31146 461 aaKnown RBP9.44□□□□□ -0.9
SS18-220ENST00000582092 HOXA9P31269 272 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 GRIA1P42261 906 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 IFNAR2P48551 515 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 OXCT1P55809 520 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 PDE1BQ01064 536 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 MGAT5Q09328 741 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ZBTB17Q13105 803 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 LAMB3Q13751 1172 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ARHGAP15Q53QZ3 475 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 TNFAIP8L3Q5GJ75 292 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 TMCO4Q5TGY1 634 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 CYS1Q717R9 158 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 TRABD2AQ86V40 505 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 NLRP14Q86W24 1093 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ARHGAP12Q8IWW6 846 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 CYP4X1Q8N118 509 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ANKS4BQ8N8V4 417 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
SS18-220ENST00000582092 IPMKQ8NFU5 416 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 SLC44A1Q8WWI5 657 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 IGSF8Q969P0 613 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 TTC17Q96AE7 1141 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ZNF669Q96BR6 464 aaPredicted RBP9.44□□□□□ -0.9
SS18-220ENST00000582092 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 HMCESQ96FZ2 354 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 CHMP6Q96FZ7 201 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 IL12RB2Q99665 862 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 PRMT1Q99873 361 aaKnown RBP9.44□□□□□ -0.9
SS18-220ENST00000582092 FICDQ9BVA6 458 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 PRKD2Q9BZL6 878 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 SLC25A51Q9H1U9 297 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ATXN3LQ9H3M9 355 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 RABEP2Q9H5N1 569 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 CASS4Q9NQ75 786 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 SYBUQ9NX95 663 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 NSMCE4AQ9NXX6 385 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ZFATQ9P243 1243 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 MUTYHQ9UIF7 546 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ZNF180Q9UJW8 692 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 ZFP37Q9Y6Q3 630 aaPredicted RBP9.44□□□□□ -0.9
SS18-220ENST00000582092 RPS6KL1Q9Y6S9 549 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 BDP1A6H8Y1 2624 aa9.44□□□□□ -0.9
SS18-220ENST00000582092 DOCK8Q8NF50 2099 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 DOCK6Q96HP0 2047 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 H0Y626 953 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 TSPAN3O60637 253 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 USP12O75317 370 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 STC2O76061 302 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 CNTN5O94779 1100 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 KIAA0754O94854 1291 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 LATS1O95835 1130 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 CKMP06732 381 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 KRT4P19013 534 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 SP100P23497 879 aaPredicted RBP9.43□□□□□ -0.9
SS18-220ENST00000582092 PRKCHP24723 683 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 CD68P34810 354 aaPredicted RBP9.43□□□□□ -0.9
SS18-220ENST00000582092 MAGEA3P43357 314 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 GNA12Q03113 381 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 SERINC3Q13530 473 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 LBRQ14739 615 aaKnown RBP9.43□□□□□ -0.9
SS18-220ENST00000582092 EFTUD2Q15029 972 aaKnown RBP eCLIP9.43□□□□□ -0.9
SS18-220ENST00000582092 PCSK7Q16549 785 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 ALFQ53S48 1182 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 PCID2Q5JVF3 399 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 FAM182AQ5T1J6 154 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 AFMIDQ63HM1 303 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 ZNF449Q6P9G9 518 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 RFWD3Q6PCD5 774 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 LILRA6Q6PI73 481 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 ARHGAP36Q6ZRI8 547 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 CHST9Q7L1S5 443 aa9.43□□□□□ -0.9
SS18-220ENST00000582092 SPATS2Q86XZ4 545 aaKnown RBP9.43□□□□□ -0.9
SS18-220ENST00000582092 UBALD2Q8IYN6 164 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms