RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 B4GALNT4Q76KP1 1039 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 UBE2Q1Q7Z7E8 422 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 CPXM2Q8N436 756 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 TDRD7Q8NHU6 1098 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 NFKBIDQ8NI38 313 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 PIGOQ8TEQ8 1089 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 NOC3LQ8WTT2 800 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 FAR1Q8WVX9 515 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 IGFBPL1Q8WX77 278 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ZNF419Q96HQ0 510 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 C7orf26Q96N11 449 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 SIGLEC11Q96RL6 698 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 CXorf56Q9H5V9 222 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 PAPOLBQ9NRJ5 636 aaKnown RBP5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 TMEM184CQ9NVA4 438 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ZDHHC7Q9NXF8 308 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 PPP1R14DQ9NXH3 145 aa5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ORC3Q9UBD5 711 aaPredicted RBP5.02□□□□□ -1.61
SMCHD1-205ENST00000581383 ITIH6Q6UXX5 1313 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 C17orf113A0A1B0GUU1 675 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 FOXO6A8MYZ6 492 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 H3BNX3 289 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 KCNAB3O43448 404 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 BAIAP3O94812 1187 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 SERPINC1P01008 464 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 CTSAP10619 480 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 UBL4AP11441 157 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 HARS2P49590 506 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 RPS13P62277 151 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 EFNB1P98172 346 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 PTP4A2Q12974 167 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 GPATCH4Q5T3I0 446 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 RUSC1-AS1Q66K80 236 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 C17orf99Q6UX52 265 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 ZNF793Q6ZN11 406 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 MOB3CQ70IA8 216 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 IGFN1Q86VF2 1251 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 DDIASQ8IXT1 998 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 NRACQ8N912 160 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 CMASQ8NFW8 434 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 EME1Q96AY2 570 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 TEFMQ96QE5 360 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 FRG2BQ96QU4 278 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 HEMGNQ9BXL5 484 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 PDCL3Q9H2J4 239 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 ACTR5Q9H9F9 607 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 PCDHB16Q9NRJ7 776 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 ATP8A2Q9NTI2 1148 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 POT1Q9NUX5 634 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 MAP3K20Q9NYL2 800 aaKnown RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 PLEKHB1Q9UF11 243 aaPredicted RBP5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 CDH22Q9UJ99 828 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 SARDHQ9UL12 918 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 SQORQ9Y6N5 450 aa5.01□□□□□ -1.61
SMCHD1-205ENST00000581383 MST1RQ04912 1400 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 KIR2DS5A0A0G2JLQ3 304 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 TEX13CA0A0J9YWL9 993 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 PABPN1LA6NDY0 278 aaKnown RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 DDTLA6NHG4 134 aaPredicted RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 KIR2DS3K7RE56 304 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 PRPF4O43172 522 aaKnown RBP eCLIP5□□□□□ -1.61
SMCHD1-205ENST00000581383 LCKP06239 509 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 CYP19A1P11511 503 aaPredicted RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 COX7A2P14406 83 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 HOXD9P28356 352 aaPredicted RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 EPHA8P29322 1005 aaPredicted RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 FOXG1P55316 489 aaPredicted RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 RPE65Q16518 533 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 SYTL3Q4VX76 610 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 SLC9B1Q4ZJI4 515 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 ALG10Q5BKT4 473 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 ALG10BQ5I7T1 473 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 ENTPD8Q5MY95 495 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 HYIQ5T013 277 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 ISM2Q6H9L7 571 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 HMBOX1Q6NT76 420 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 AAGABQ6PD74 315 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 IL20RBQ6UXL0 311 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 PRSS45Q7RTY3 260 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 WDR5BQ86VZ2 330 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 DIS3L2Q8IYB7 885 aaKnown RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 C16orf52Q8NHV5 167 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 WIPF2Q8TF74 440 aaPredicted RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 TUBB6Q9BUF5 446 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 ENTPD7Q9NQZ7 604 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 BABAM1Q9NWV8 329 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 WWOXQ9NZC7 414 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 GRHL1Q9NZI5 618 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 KCND2Q9NZV8 630 aa5□□□□□ -1.61
SMCHD1-205ENST00000581383 AGO2Q9UKV8 859 aaKnown RBP5□□□□□ -1.61
SMCHD1-205ENST00000581383 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 A0A087X0M5 115 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TRBV5-3A0A0A0MS03 114 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TRBV5-7A0A0A0MS05 114 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 A0A1B0GX30 115 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 HMGB1P1B2RPK0 211 aaPredicted RBP4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 F8W810 466 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TNFSF14O43557 240 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 TMCC1O94876 653 aa4.99□□□□□ -1.61
SMCHD1-205ENST00000581383 SLC16A2P36021 539 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms