RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 FBRSL1Q9HCM7 1045 aaKnown RBP12.39□□□□□ -0.43
CCDC84-209ENST00000580556 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
CCDC84-209ENST00000580556 VPS28Q9UK41 221 aa12.39□□□□□ -0.43
CCDC84-209ENST00000580556 INTS6Q9UL03 887 aaKnown RBP12.39□□□□□ -0.43
CCDC84-209ENST00000580556 CHD5Q8TDI0 1954 aa12.39□□□□□ -0.43
CCDC84-209ENST00000580556 BCLAF3A2AJT9 711 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 PGRMC1O00264 195 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 TRIM24O15164 1050 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 CEP104O60308 925 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 RNF40O75150 1001 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 ZMPSTE24O75844 475 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 EGFP01133 1207 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 FGGP02679 453 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 ATP5BP06576 529 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 CXCR5P32302 372 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 GARSP41250 739 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 GEMIN4P57678 1058 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 DYNLT1P63172 113 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 SLC20A2Q08357 652 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 MESP2Q0VG99 397 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 PDK1Q15118 436 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 TMEM215Q68D42 235 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 MBLAC2Q68D91 279 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 AADACL2Q6P093 401 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 ATPAF2Q8N5M1 289 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 OR7D4Q8NG98 312 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 P3H4Q92791 437 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 HDAC11Q96DB2 347 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 HMCESQ96FZ2 354 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 CELF6Q96J87 481 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 TSGA13Q96PP4 275 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 SLC39A8Q9C0K1 460 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 ATP13A1Q9HD20 1204 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 ELOVL2Q9NXB9 296 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 KLK13Q9UKR3 277 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 HPCAL4Q9UM19 191 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 LAMA5O15230 3695 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 LOC400499M0QZD8 3231 aa12.38□□□□□ -0.43
CCDC84-209ENST00000580556 DSPP15924 2871 aaKnown RBP12.38□□□□□ -0.43
CCDC84-209ENST00000580556 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 TBC1D3BA6NDS4 549 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 HACD1B0YJ81 288 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 ESPNB1AK53 854 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 PRRT4C9JH25 899 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 DFFAO00273 331 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 PPP1R12AO14974 1030 aaPredicted RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 KDELR3O43731 214 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 PRAMEF11O60813 436 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 SRPRAP08240 638 aaKnown RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 DLDP09622 509 aaKnown RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 CEACAM1P13688 526 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 PECAM1P16284 738 aaPredicted RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 POLR2EP19388 210 aaKnown RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 ACVRL1P37023 503 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 PAPOLAP51003 745 aaKnown RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 CLCN6P51797 869 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 ECT2LQ008S8 904 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 IL10RBQ08334 325 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 PPIDQ08752 370 aaKnown RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 SLC10A2Q12908 348 aaPredicted RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 XRCC4Q13426 336 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 NOMO1Q15155 1222 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 UAP1L1Q3KQV9 507 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 SOWAHCQ53LP3 525 aaPredicted RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 TMCO4Q5TGY1 634 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 CCDC181Q5TID7 509 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 RETSATQ6NUM9 610 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 C19orf48Q6RUI8 117 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 APCDD1Q8J025 514 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 COG1Q8WTW3 980 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 UCMAQ8WVF2 138 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 CASKIN2Q8WXE0 1202 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 ZNF599Q96NL3 588 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 PDFQ9HBH1 243 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 HOMER3Q9NSC5 361 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 VPS51Q9UID3 782 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 HS3ST2Q9Y278 367 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 HEY1Q9Y5J3 304 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 MYOFQ9NZM1 2061 aa12.37□□□□□ -0.43
CCDC84-209ENST00000580556 ASCC3Q8N3C0 2202 aaKnown RBP12.37□□□□□ -0.43
CCDC84-209ENST00000580556 SMG1Q96Q15 3661 aaKnown RBP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 MUC22E2RYF6 1773 aaPredicted RBP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 K7EQS6 105 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 MCF2LO15068 1137 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 MAFKO60675 156 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 HNRNPLP14866 589 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 CSRP1P21291 193 aaKnown RBP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 CCNCP24863 283 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 KIR2DL1P43626 348 aaPredicted RBP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 IRX4P78413 519 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 ARF5P84085 180 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 OTUD4Q01804 1114 aaKnown RBP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 ENPP2Q13822 863 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 TUBB2AQ13885 445 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 RFTN1Q14699 578 aaPredicted RBP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 PRKD1Q15139 912 aaPredicted RBP12.36□□□□□ -0.43
CCDC84-209ENST00000580556 LLGL1Q15334 1064 aa12.36□□□□□ -0.43
CCDC84-209ENST00000580556 ELF2Q15723 593 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms