RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 POLMQ9NP87 494 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KLHL8Q9P2G9 620 aaPredicted RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TRHDEQ9UKU6 1024 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 DNPEPQ9ULA0 475 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 DRG1Q9Y295 367 aaKnown RBP11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 STON1Q9Y6Q2 735 aa11.47□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZFHX2Q9C0A1 2572 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TCRBV7S2A1N4TA0A589 114 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GOLGA6CA6NDK9 693 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GOLGA6BA6NDN3 693 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KCNN4O15554 427 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LIASO43766 372 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PHF2O75151 1096 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ALDH1A2O94788 518 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ITGAVP06756 1048 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GOLGA6DP0CG33 693 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HOXB2P14652 356 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CA4P22748 312 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CHRNA3P32297 505 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 IL12RB1P42701 662 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TNNT3P45378 269 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FNTAP49354 379 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CLCN5P51795 746 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NSUN2Q08J23 767 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MESP2Q0VG99 397 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SFSWAPQ12872 951 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GRM3Q14832 879 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HNRNPA1L2Q32P51 320 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 C4orf22Q6V702 233 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CREG2Q8IUH2 290 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TP53INP2Q8IXH6 220 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PLPP6Q8IY26 295 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCDC105Q8IYK2 499 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RYBPQ8N488 228 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ALLCQ8N6M5 410 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCDC89Q8N998 374 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 C12orf50Q8NA57 414 aaPredicted RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TXNDC5Q8NBS9 432 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ATL2Q8NHH9 583 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SORCS1Q8WY21 1168 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 OR8D1Q8WZ84 308 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MAGOHBQ96A72 148 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CLDN23Q96B33 292 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PSKH2Q96QS6 385 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 AP1M1Q9BXS5 423 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FAM86C1Q9NVL1 165 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RBM22Q9NW64 420 aaKnown RBP eCLIP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CACNA2D2Q9NY47 1150 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GOLGA6AQ9NYA3 693 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MMP17Q9ULZ9 603 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FCF1Q9Y324 198 aaKnown RBP11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TTLL3Q9Y4R7 772 aa11.46□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CEP192Q8TEP8 1941 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SHISA7A6NL88 538 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TTC34A8MYJ7 566 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SGK1O00141 431 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 KCNK1O00180 336 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ALOX15BO15296 676 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 BNIP3LO60238 219 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GAS8O95995 478 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MT-CO1P00395 513 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 JCHAINP01591 159 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 AOC1P19801 751 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 RBL1P28749 1068 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CSNK1DP48730 415 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 DGKEP52429 567 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SLC10A7Q0GE19 358 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SNX1Q13596 522 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ENPP2Q13822 863 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PRPSAP1Q14558 356 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ELAVL3Q14576 367 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SIX1Q15475 284 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TEX44Q53QW1 395 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CARD16Q5EG05 197 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CCDC137Q6PK04 289 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 LEKR1Q6ZMV7 388 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ARHGEF18Q6ZSZ5 1173 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SYT13Q7L8C5 426 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SPEM1Q8N4L4 309 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TEX26Q8N6G2 289 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 PAF1Q8N7H5 531 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CEP112Q8N8E3 955 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 IL17RCQ8NAC3 791 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 OR2AP1Q8NGE2 309 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CCHCR1Q8TD31 782 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 ATG4AQ8WYN0 398 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 EZH1Q92800 747 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 LRIG1Q96JA1 1093 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 IL12RB2Q99665 862 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 GABRG3Q99928 467 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 FAM118BQ9BPY3 351 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CHRDQ9H2X0 955 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 TMEM245Q9H330 911 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 NT5MQ9NPB1 228 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 RBM12Q9NTZ6 932 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 SLCO3A1Q9UIG8 710 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 R3HDM2Q9Y2K5 976 aaKnown RBP11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 MRFAP1Q9Y605 127 aa11.45□□□□□ -0.58
CDK5RAP3-210ENST00000578733 CACNA1HO95180 2353 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms