RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 PARGQ86W56 976 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 ZNF843Q8N446 348 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 PCDH20Q8N6Y1 951 aaKnown RBP12.05□□□□□ -0.48
CDH8-202ENST00000577228 ZNF548Q8NEK5 533 aaPredicted RBP12.05□□□□□ -0.48
CDH8-202ENST00000577228 IFI44Q8TCB0 444 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 PGAP3Q96FM1 320 aaPredicted RBP12.05□□□□□ -0.48
CDH8-202ENST00000577228 FEM1CQ96JP0 617 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 BMFQ96LC9 184 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 C1orf74Q96LT6 269 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 TBCBQ99426 244 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 SLC17A9Q9BYT1 436 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 CEP44Q9C0F1 390 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 OSBPL2Q9H1P3 480 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 PDCL3Q9H2J4 239 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 POLR1BQ9H9Y6 1135 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 TMPRSS4Q9NRS4 437 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 GPR27Q9NS67 375 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 TMEM51Q9NW97 253 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 DNAJC12Q9UKB3 198 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 AJAP1Q9UKB5 411 aaPredicted RBP12.05□□□□□ -0.48
CDH8-202ENST00000577228 U3KQA8 63 aa12.05□□□□□ -0.48
CDH8-202ENST00000577228 TDRD6O60522 2096 aaKnown RBP12.05□□□□□ -0.48
CDH8-202ENST00000577228 BPTFQ12830 3046 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 FLNBO75369 2602 aaKnown RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 IGLV3-10A0A075B6K4 115 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 ILVBLA1L0T0 632 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 POM121BA6NF01 834 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 ERVH48-1M5A8F1 160 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 FOXN3O00409 490 aaPredicted RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 RAD51BO15315 384 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 CSF2P04141 144 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 NME1P15531 152 aaKnown RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 L1CAMP32004 1257 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 CLCN1P35523 988 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 SCNN1AP37088 669 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 MTIF2P46199 727 aaKnown RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 RABIFP47224 123 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 BPIFB4P59827 614 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 ERVPABLB-1P60509 514 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 CFHR1Q03591 330 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 SLC20A2Q08357 652 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 BECN1Q14457 450 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 CDKN3Q16667 212 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 SLC25A52Q3SY17 297 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 FAM102AQ5T9C2 384 aaPredicted RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 ZCCHC8Q6NZY4 707 aaKnown RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 PCSK4Q6UW60 755 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 PARS2Q7L3T8 475 aaKnown RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 TMEM35BQ8NCS4 154 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 KCNE4Q8WWG9 221 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 NT5C3BQ969T7 300 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 HEPHQ9BQS7 1158 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 ATP13A1Q9HD20 1204 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 SIX2Q9NPC8 291 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 THSD1Q9NS62 852 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 NCKIPSDQ9NZQ3 722 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 IPO11Q9UI26 975 aaKnown RBP12.04□□□□□ -0.48
CDH8-202ENST00000577228 FADS3Q9Y5Q0 445 aa12.04□□□□□ -0.48
CDH8-202ENST00000577228 ZNF462Q96JM2 2506 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 TRPM6Q9BX84 2022 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 SPTY2D1-AS1A0A0U1RR47 76 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 CPED1A4D0V7 1026 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 CAPN8A6NHC0 703 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 FPGTO14772 594 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 KLK10O43240 276 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 AP1G1O43747 822 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 LZTS3O60299 673 aaPredicted RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 SRGAP2O75044 1071 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 ZNF821O75541 412 aaPredicted RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 ZMPSTE24O75844 475 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 PAK4O96013 591 aaPredicted RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 CCNHP51946 323 aaPredicted RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 RHDQ02161 417 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 GNA12Q03113 381 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 SGCGQ13326 291 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 PDE1CQ14123 709 aaPredicted RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 ISXQ2M1V0 245 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 CARD16Q5EG05 197 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 ARHGAP40Q5TG30 622 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 EFL1Q7Z2Z2 1120 aaKnown RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 ZSCAN30Q86W11 494 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 FAM71AQ8IYT1 594 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 C18orf8Q96DM3 657 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 VCPIP1Q96JH7 1222 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 HAPLN3Q96S86 360 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 ZYG11BQ9C0D3 744 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 ZDHHC6Q9H6R6 413 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 ASCL3Q9NQ33 180 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 ZNF212Q9UDV6 495 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 FCF1Q9Y324 198 aaKnown RBP12.03□□□□□ -0.48
CDH8-202ENST00000577228 CSNK1G3Q9Y6M4 447 aa12.03□□□□□ -0.48
CDH8-202ENST00000577228 SETXQ7Z333 2677 aaKnown RBP12.02□□□□□ -0.49
CDH8-202ENST00000577228 FAM170AA1A519 330 aa12.02□□□□□ -0.49
CDH8-202ENST00000577228 IGLON5A6NGN9 336 aa12.02□□□□□ -0.49
CDH8-202ENST00000577228 GOLGA8SH3BPF8 625 aa12.02□□□□□ -0.49
CDH8-202ENST00000577228 NEMP1O14524 444 aa12.02□□□□□ -0.49
CDH8-202ENST00000577228 RIOK3O14730 519 aaKnown RBP12.02□□□□□ -0.49
CDH8-202ENST00000577228 AQP9O43315 295 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms