RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 AOC1P19801 751 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 CCDC142Q17RM4 750 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 KIAA1841Q6NSI8 718 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 METTL7BQ6UX53 244 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 CERS5Q8N5B7 392 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 AMER2Q8N7J2 671 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 SEPT8Q92599 483 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 HSPBAP1Q96EW2 488 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 TCRBV7S3A2A0A539 114 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 IDH3BO43837 385 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 OAS1P00973 400 aaKnown RBP13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 ITGAXP20702 1163 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 GBE1Q04446 702 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 GJC2Q5T442 439 aaPredicted RBP13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 METTL6Q8TCB7 284 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC2A14Q8TDB8 520 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 P2RY11Q96G91 374 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 TBCDQ9BTW9 1192 aa13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 LEF1Q9UJU2 399 aaPredicted RBP13.27□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A9O60656 530 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 IMPDH2P12268 514 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 HGFP14210 728 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 NFKB1P19838 968 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 IL12RB1P42701 662 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 BACE1P56817 501 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZNF484Q5JVG2 852 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 LDLRAP1Q5SW96 308 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 TBC1D21Q8IYX1 336 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 MIPEPQ99797 713 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 CHID1Q9BWS9 393 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 RERGLQ9H628 205 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A7Q9HAW7 530 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A10Q9HAW8 530 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 UGT1A8Q9HAW9 530 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC38A7Q9NVC3 462 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 GIN1Q9NXP7 522 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 UBAP1Q9NZ09 502 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 STMN3Q9NZ72 180 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 C2orf81A6NN90 581 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 CST3P01034 146 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 PABPC4LP0CB38 370 aaKnown RBP13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 PCNAP12004 261 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 GSSP48637 474 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLC18A2Q05940 514 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 CTBP1Q13363 440 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 NDUFA5Q16718 116 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 PFKFB4Q16877 469 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 DALRD3Q5D0E6 543 aaKnown RBP13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 CEP78Q5JTW2 689 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 SLCO6A1Q86UG4 719 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 XYLT1Q86Y38 959 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 BSNDQ8WZ55 320 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 EDEM1Q92611 657 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 RHOJQ9H4E5 214 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 C8orf4Q9NR00 106 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 KLHL3Q9UH77 587 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 FAM149AA5PLN7 773 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 TRIM43BA6NCK2 446 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 OR6B1O95007 311 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 NFICP08651 508 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 SPIRE1Q08AE8 756 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 TWF1Q12792 350 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 CRTC3Q6UUV7 619 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 SPPL2CQ8IUH8 684 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 NETO2Q8NC67 525 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 UTP15Q8TED0 518 aaKnown RBP13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 ZHX1-C8orf76Q96EF9 292 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 ACOX2Q99424 681 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 HOPXQ9BPY8 73 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 NUAK2Q9H093 628 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 ENTPD7Q9NQZ7 604 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 MPP6Q9NZW5 540 aa13.26□□□□□ -0.29
PCDHGB3-201ENST00000576222 RNASEH1O60930 286 aaKnown RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 RAB14P61106 215 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 MAPRE1Q15691 268 aaKnown RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 ATG14Q6ZNE5 492 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 LUZP2Q86TE4 346 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 TREML1Q86YW5 311 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 FAM9CQ8IZT9 166 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 PTGR2Q8N8N7 351 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 OR6J1Q8NGC5 347 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 OTULINQ96BN8 352 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 GPR63Q9BZJ6 419 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 CRYL1Q9Y2S2 319 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 MYH7BA7E2Y1 1941 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 LOC100506127A0A0U1RQW1 187 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 POU1F1P28069 291 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 THOP1P52888 689 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 PAGE2BQ5JRK9 111 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 PRAMEF18Q5VWM3 479 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 UTS2BQ765I0 119 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 SAPCD2Q86UD0 394 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 ANKRD52Q8NB46 1076 aa13.25□□□□□ -0.29
PCDHGB3-201ENST00000576222 SEMA4BQ9NPR2 832 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms