RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PRAMEF14Q5SWL7 426 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 AGBL4Q5VU57 503 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 NAPEPLDQ6IQ20 393 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 RETSATQ6NUM9 610 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 DNAJC24Q6P3W2 148 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 SYT10Q6XYQ8 523 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 ARCQ7LC44 396 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 RAB44Q7Z6P3 723 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 MNS1Q8NEH6 495 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 GATA6Q92908 595 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 ELF4Q99607 663 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 DNAJC7Q99615 494 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 MYOCQ99972 504 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 EDEM3Q9BZQ6 932 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 RAB6CQ9H0N0 254 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 DEF6Q9H4E7 631 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 LUC7LQ9NQ29 371 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 MYO1AQ9UBC5 1043 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 OR12D3Q9UGF7 316 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 IL36AQ9UHA7 158 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 DNAI1Q9UI46 699 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 ZMIZ1Q9ULJ6 1067 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 PPM1HQ9ULR3 514 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 MSRB2Q9Y3D2 182 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 MYLKQ15746 1914 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 GOLGA4Q13439 2230 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 A0A1B0GTQ1 180 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 C2CD4BA6NLJ0 364 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 YKT6O15498 198 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 SMAD6O43541 496 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 PCDHGA12O60330 932 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 MAGEC1O60732 1142 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 RNGTTO60942 597 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 PCDH8O95206 1070 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 SLU7O95391 586 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 WNT1P04628 370 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 CTSLP07711 333 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 UNGP13051 313 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 ADRA1BP35368 520 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 NUDT1P36639 197 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 ETFBP38117 255 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 PTPN9P43378 593 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 ARRB1P49407 418 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 SERPINH1P50454 418 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 GNG11P61952 73 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 GNA12Q03113 381 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 STAT4Q14765 748 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 SPA17Q15506 151 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 EFHC2Q5JST6 749 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 SCYL2Q6P3W7 929 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 ZNF783Q6ZMS7 281 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 STRADAQ7RTN6 431 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 BNIPLQ7Z465 357 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 GLRX5Q86SX6 157 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 KIAA1328Q86T90 577 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 TRIM69Q86WT6 500 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 GATAD2AQ86YP4 633 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 CCDC170Q8IYT3 715 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 RYBPQ8N488 228 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 OXR1Q8N573 874 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 CCDC185Q8N715 623 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 CHST14Q8NCH0 376 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 C3orf20Q8ND61 904 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 OR2A12Q8NGT7 310 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 BAHD1Q8TBE0 780 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 ADAMTS14Q8WXS8 1223 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 KLK6Q92876 244 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 TBC1D31Q96DN5 1066 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 MCEEQ96PE7 176 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 PCDHB18PQ96TA0 734 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 AGPAT1Q99943 283 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 DESI2Q9BSY9 194 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 TM6SF2Q9BZW4 377 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 TSGA10Q9BZW7 698 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 ZDHHC6Q9H6R6 413 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 PREBQ9HCU5 417 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 PPARGC1AQ9UBK2 798 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 HPCAL4Q9UM19 191 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 DMTF1Q9Y222 760 aa9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 FCF1Q9Y324 198 aaKnown RBP9.86□□□□□ -0.83
NPLOC4-216ENST00000574344 LRRK1Q38SD2 2015 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 SHROOM3Q8TF72 1996 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 A0A1W2PR77 199 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 TLR4O00206 839 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 WNT9AO14904 365 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 SLC31A1O15431 190 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 TNFSF14O43557 240 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 LATO43561 262 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 RAMP2O60895 175 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 LEFTY1O75610 366 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 ATXN1LP0C7T5 689 aaKnown RBP9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 PRLRP16471 622 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 FERP16591 822 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 RFC1P35251 1148 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 ACVRL1P37023 503 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 MAPKAPK2P49137 400 aa9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 GSCP56915 257 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-216ENST00000574344 GEMIN4P57678 1058 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms