RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 RFXAPO00287 272 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 TIMM44O43615 452 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 DNTTP04053 509 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 TFE3P19532 575 aaPredicted RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 PBLDP30039 288 aaPredicted RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 HADHAP40939 763 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 PEX5P50542 639 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 ERVFC1P60507 584 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 SETMARQ53H47 684 aaPredicted RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 C2orf27AQ580R0 203 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 LY6G5CQ5SRR4 150 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 SMYD5Q6GMV2 418 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 EBF3Q9H4W6 596 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 HCFC2Q9Y5Z7 792 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 SUN1O94901 812 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 PABPC1P11940 636 aaKnown RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 HNRNPDQ14103 355 aaKnown RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 GRM2Q14416 872 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 RASIP1Q5U651 963 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 UGT3A1Q6NUS8 523 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 LRIG3Q6UXM1 1119 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 ANKS1BQ7Z6G8 1248 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 KCNMB4Q86W47 210 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 CXorf40AQ8TE69 158 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 C1QTNF7Q9BXJ2 289 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 VPS45Q9NRW7 570 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MARCH5Q9NX47 278 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 PKD2L2Q9NZM6 624 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MAFFQ9ULX9 164 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 HIDE1A8MVS5 230 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MAP3K7O43318 606 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 ADH5P11766 374 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 PGAM1P18669 254 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MAGEA9P43362 315 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 SEC13P55735 322 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 STX1BP61266 288 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 ERVK-21P61565 698 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 GALNT3Q14435 633 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 UBXN2BQ14CS0 331 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 FAM124AQ86V42 546 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 WDR75Q8IWA0 830 aaKnown RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 ZCCHC9Q8N567 271 aaKnown RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 MAML1Q92585 1016 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 SGF29Q96ES7 293 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 THOC1Q96FV9 657 aaKnown RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 PAFAH2Q99487 392 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 PITPNM3Q9BZ71 974 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 DRC3Q9H069 523 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 LMAN2LQ9H0V9 348 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 ZNF576Q9H609 170 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 FCF1Q9Y324 198 aaKnown RBP10.25□□□□□ -0.77
SMG6-213ENST00000573166 KIAA1217Q5T5P2 1943 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 H0YGN5 161 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MATN3O15232 486 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MSH3P20585 1137 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 CSKP41240 450 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 GRSF1Q12849 480 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMG6-213ENST00000573166 PDGFRLQ15198 375 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MS4A13Q5J8X5 152 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 PCID2Q5JVF3 399 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 SLC26A11Q86WA9 606 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 LRRC39Q96DD0 335 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 VIPAS39Q9H9C1 493 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 FNIP2Q9P278 1114 aa10.25□□□□□ -0.77
SMG6-213ENST00000573166 MYH10P35580 1976 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 BCLAF3A2AJT9 711 aaKnown RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 IRAK1P51617 712 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 DSC2Q02487 901 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 FAM83EQ2M2I3 478 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 C9orf50Q5SZB4 431 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 NEPROQ6NW34 567 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 MTSS1LQ765P7 747 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 TDHQ8IZJ6 230 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 RIBC1Q8N443 379 aaPredicted RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 HNRNPLLQ8WVV9 542 aaKnown RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 IRF7Q92985 503 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 ACDQ96AP0 544 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 QKIQ96PU8 341 aaKnown RBP eCLIP10.24□□□□□ -0.77
SMG6-213ENST00000573166 CD274Q9NZQ7 290 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SMG5Q9UPR3 1016 aaKnown RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 NR2E1Q9Y466 385 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 PCDHGC4Q9Y5F7 938 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SIPA1L1O43166 1804 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SEC24AO95486 1093 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 TYRP14679 529 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 STMN1P16949 149 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 ZNF7P17097 686 aaPredicted RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 HOXB8P17481 243 aaPredicted RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 ITGB6P18564 788 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 HLA-DPA1P20036 260 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 THOP1P52888 689 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 IL10RBQ08334 325 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 SCARA3Q6AZY7 606 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 ADCK2Q7Z695 626 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 TRIM48Q8IWZ4 208 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 EPS8L3Q8TE67 593 aaKnown RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 E2F7Q96AV8 911 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 ZCCHC2Q9C0B9 1178 aaKnown RBP10.24□□□□□ -0.77
SMG6-213ENST00000573166 BPIFA1Q9NP55 256 aa10.24□□□□□ -0.77
SMG6-213ENST00000573166 HCFC1R1Q9NWW0 138 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms