RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 FAM46CQ5VWP2 391 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 C22orf39Q6P5X5 142 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 LEKR1Q6ZMV7 388 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 RFX8Q6ZV50 586 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 NLRP14Q86W24 1093 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 TMTC1Q8IUR5 882 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 PSTKQ8IV42 348 aaKnown RBP7.94□□□□□ -1.14
SMG6-211ENST00000572369 RHOT2Q8IXI1 618 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 CCDC170Q8IYT3 715 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 ARFGAP1Q8N6T3 406 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 NIPA2Q8N8Q9 360 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 KCTD6Q8NC69 237 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 SLC35G2Q8TBE7 412 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 SNX19Q92543 992 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 PIGKQ92643 395 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 PTPRN2Q92932 1015 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 FOXJ1Q92949 421 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 HSPA12BQ96MM6 686 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 PANX2Q96RD6 677 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 BTBD1Q9H0C5 482 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 RSPH9Q9H1X1 276 aaPredicted RBP7.94□□□□□ -1.14
SMG6-211ENST00000572369 TNKS2Q9H2K2 1166 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 OSGEPQ9NPF4 335 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 DYRK4Q9NR20 520 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG6-211ENST00000572369 FBXL12Q9NXK8 326 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 WSB2Q9NYS7 404 aaPredicted RBP7.94□□□□□ -1.14
SMG6-211ENST00000572369 USP36Q9P275 1121 aaKnown RBP7.94□□□□□ -1.14
SMG6-211ENST00000572369 HS3ST2Q9Y278 367 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 PCDHGA5Q9Y5G8 931 aa7.94□□□□□ -1.14
SMG6-211ENST00000572369 ATXN2Q99700 1313 aaKnown RBP7.94□□□□□ -1.14
SMG6-211ENST00000572369 TNRC6BQ9UPQ9 1833 aaKnown RBP7.94□□□□□ -1.14
SMG6-211ENST00000572369 ABCA7Q8IZY2 2146 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 A0A1W2PP55 124 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 BCLAF3A2AJT9 711 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 ZSCAN5CA6NGD5 496 aaPredicted RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 WASH4PA8MWX3 477 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 K7ERQ8 282 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 ALOX15BO15296 676 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 MID1O15344 667 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 SMAD6O43541 496 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 KDELR3O43731 214 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 PROSCO94903 275 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 CFIP05156 583 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 KRT7P08729 469 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 CEACAM1P13688 526 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 TNNT1P13805 278 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 TCF4P15884 667 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 ERCC2P18074 760 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 C5AR1P21730 350 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 IL1R2P27930 398 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 CDC25BP30305 580 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 ARHGAP25P42331 645 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 DPP6P42658 865 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 PTGER3P43115 390 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 SERPINH1P50454 418 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 VASPP50552 380 aaPredicted RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 NDST2P52849 883 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 NAP1L1P55209 391 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 CDH6P55285 790 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 ARF5P84085 180 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 CCDC15Q0P6D6 951 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 SEMA3BQ13214 749 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 POM121L1PQ3SYA9 428 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 PARP15Q460N3 678 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 CARD16Q5EG05 197 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 SPDYCQ5MJ68 293 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 WDR45BQ5MNZ6 344 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 TMCO3Q6UWJ1 677 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 MAP7D3Q8IWC1 876 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 UMODL1-AS1Q8N2C9 162 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 HDDC3Q8N4P3 179 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 PCDH20Q8N6Y1 951 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 PAF1Q8N7H5 531 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 GRIN3AQ8TCU5 1115 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 TEKT4Q8WW24 435 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 RFFLQ8WZ73 363 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 HMCESQ96FZ2 354 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 PPP1R16AQ96I34 528 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 CELF6Q96J87 481 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 FAM129BQ96TA1 746 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 BAG1Q99933 345 aaPredicted RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 NUSAP1Q9BXS6 441 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 CALN1Q9BXU9 219 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 ACE2Q9BYF1 805 aaPredicted RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 TM6SF2Q9BZW4 377 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 MIR1-1HGQ9H1L0 117 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 PABPC3Q9H361 631 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 SMOC1Q9H4F8 434 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 ZDHHC6Q9H6R6 413 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 SP110Q9HB58 689 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 VPS45Q9NRW7 570 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 CWC15Q9P013 229 aaKnown RBP7.93□□□□□ -1.14
SMG6-211ENST00000572369 IMPACTQ9P2X3 320 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 ZNF212Q9UDV6 495 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 IL36AQ9UHA7 158 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 INTUQ9ULD6 942 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 NENFQ9UMX5 172 aa7.93□□□□□ -1.14
SMG6-211ENST00000572369 FCF1Q9Y324 198 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms