RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ANAPC7Q9UJX3 599 aa8.86□□□□□ -0.99
SMG6-210ENST00000572205 FZD4Q9ULV1 537 aa8.86□□□□□ -0.99
SMG6-210ENST00000572205 USP18Q9UMW8 372 aa8.86□□□□□ -0.99
SMG6-210ENST00000572205 FCF1Q9Y324 198 aaKnown RBP8.86□□□□□ -0.99
SMG6-210ENST00000572205 REXO2Q9Y3B8 237 aaKnown RBP8.86□□□□□ -0.99
SMG6-210ENST00000572205 ITPR1Q14643 2758 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 IGF2RP11717 2491 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 C3orf70A6NLC5 250 aaPredicted RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 EIF3CLB5ME19 914 aaKnown RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 RASA4BC9J798 803 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 MUSKO15146 869 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 FGF10O15520 208 aaPredicted RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 RASA4O43374 803 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 PLRG1O43660 514 aaKnown RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 RAMP2O60895 175 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 SEMA4FO95754 770 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 F12P00748 615 aaPredicted RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 WNT1P04628 370 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 TMEM253P0C7T8 217 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 ERCC2P18074 760 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 C5AR1P21730 350 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 MAOBP27338 520 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 EPHB2P29323 1055 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 SLC8A1P32418 973 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 RGRP47804 291 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 ST8SIA6P61647 398 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 CNTN1Q12860 1018 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 IHHQ14623 411 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 ACAP1Q15027 740 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 E2F5Q15329 346 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 ARL13BQ3SXY8 428 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 TRIM61Q5EBN2 209 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 CCDC122Q5T0U0 273 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 ERMARDQ5T6L9 678 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 DCAF12L1Q5VU92 463 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 RWDD4Q6NW29 188 aaKnown RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 SCYL2Q6P3W7 929 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 BLOC1S3Q6QNY0 202 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 LAYNQ6UX15 382 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 POLNQ7Z5Q5 900 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 FAM124AQ86V42 546 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 GPR161Q8N6U8 529 aaKnown RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 OR2I1PQ8NGU4 316 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 PIP4K2CQ8TBX8 421 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 NETO1Q8TDF5 533 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 TEKT4Q8WW24 435 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 PIGKQ92643 395 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 ISG20Q96AZ6 181 aaKnown RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 FAF2Q96CS3 445 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 CSPG4P5Q96PW8 444 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 EIF3CQ99613 913 aaKnown RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 HINFPQ9BQA5 517 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 EDEM2Q9BV94 578 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 NEUROG2Q9H2A3 272 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 TNKS2Q9H2K2 1166 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 DHX35Q9H5Z1 703 aaKnown RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 NHEJ1Q9H9Q4 299 aaPredicted RBP8.85□□□□□ -0.99
SMG6-210ENST00000572205 PCDH18Q9HCL0 1135 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 IGSF5Q9NSI5 407 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 MAP10Q9P2G4 905 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 SALL4Q9UJQ4 1053 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 SLC25A13Q9UJS0 675 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 SCML1Q9UN30 329 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 TFR2Q9UP52 801 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 DMXL2Q8TDJ6 3036 aa8.85□□□□□ -0.99
SMG6-210ENST00000572205 EPG5Q9HCE0 2579 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 PLXNB3Q9ULL4 1909 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 A0A1W2PR77 199 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 J3KR12 359 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 CBX4O00257 560 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 EEF2KO00418 725 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 KDELR3O43731 214 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 CREB3O43889 395 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 PRAMEF11O60813 436 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 TMCC1O94876 653 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 PROSCO94903 275 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 ADH1BP00325 375 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 GSRP00390 522 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 SERPINF2P08697 491 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 ENGP17813 658 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 OXTRP30559 389 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 GKP32189 559 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 MAN1A1P33908 653 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 MAP1BP46821 2468 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 SERPINB4P48594 390 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 HCAR3P49019 387 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 CCNHP51946 323 aaPredicted RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 YBEYP58557 167 aaPredicted RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 TPI1P60174 286 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 GRIK2Q13002 908 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 BYSLQ13895 437 aaKnown RBP8.84□□□□□ -0.99
SMG6-210ENST00000572205 DPYSL3Q14195 570 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 FGL2Q14314 439 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 CYTH1Q15438 398 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 PARP15Q460N3 678 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 ATP13A4Q4VNC1 1196 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 STPG1Q5TH74 334 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 NCEH1Q6PIU2 408 aa8.84□□□□□ -0.99
SMG6-210ENST00000572205 LEKR1Q6ZMV7 388 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms