RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MZF1P28698 734 aaPredicted RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 AKT2P31751 481 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 COPB1P53618 953 aaKnown RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 EFEMP1Q12805 493 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 ERV3-1Q14264 604 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 KLHL40Q2TBA0 621 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 KRT79Q5XKE5 535 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 ESRP1Q6NXG1 681 aaKnown RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 GCNT7Q6ZNI0 430 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 DYMQ7RTS9 669 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 SLITRK4Q8IW52 837 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 BRSK2Q8IWQ3 736 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 FAM217AQ8IXS0 508 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 CISD2Q8N5K1 135 aaKnown RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 ZSWIM2Q8NEG5 633 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 FBF1Q8TES7 1133 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 SAAL1Q96ER3 474 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 TMA16Q96EY4 203 aaKnown RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 SMARCD1Q96GM5 515 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 MRGPRX3Q96LB0 322 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 TAAR9Q96RI9 348 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 SMOQ99835 787 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 B3GNT4Q9C0J1 378 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 PDE11AQ9HCR9 933 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 LMBRD1Q9NUN5 540 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHD3-213ENST00000571249 RBAKQ9NYW8 714 aaPredicted RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 SIRPGQ9P1W8 387 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 NAGPAQ9UK23 515 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 PILRAQ9UKJ1 303 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 PNMA8BQ9ULN7 279 aaPredicted RBP7.11□□□□□ -1.27
CHD3-213ENST00000571249 SMC3Q9UQE7 1217 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 SCML2Q9UQR0 700 aa7.11□□□□□ -1.27
CHD3-213ENST00000571249 EDDM13A0A1B0GTR0 161 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 A0A1W2PQU0 124 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 FAM221AA4D161 298 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 POM121BA6NF01 834 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 ZSCAN5CA6NGD5 496 aaPredicted RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 STX6O43752 255 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 ZSCAN22P10073 491 aaPredicted RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 PDCP20941 246 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 SYT1P21579 422 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 SCP2P22307 547 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 SSTR2P30874 369 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 CSTF2P33240 577 aaKnown RBP eCLIP7.1□□□□□ -1.27
CHD3-213ENST00000571249 MAP3K7CLP57077 242 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 GTF2BQ00403 316 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 CDK18Q07002 472 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 FOXD4Q12950 439 aaPredicted RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 EIF2B5Q13144 721 aaKnown RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 ARID5BQ14865 1188 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 AGERQ15109 404 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 TCEA2Q15560 299 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 ARSHQ5FYA8 562 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 EFHC2Q5JST6 749 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 GPRIN1Q7Z2K8 1008 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 PTAR1Q7Z6K3 402 aaPredicted RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 ABI3BPQ7Z7G0 1075 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 SCD5Q86SK9 330 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 TADA2BQ86TJ2 420 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 PARGQ86W56 976 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 BPHLQ86WA6 291 aaPredicted RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 DCP2Q8IU60 420 aaKnown RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 KYQ8NBH2 561 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 OR5B17Q8NGF7 314 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 WFDC5Q8TCV5 224 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 WASF1Q92558 559 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 ART4Q93070 314 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 JAKMIP2Q96AA8 810 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 TTC17Q96AE7 1141 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 FAM131CQ96AQ9 280 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 RNF31Q96EP0 1072 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 ANKRD36BP1Q96IX9 119 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 BMFQ96LC9 184 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 PLIN2Q99541 437 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 CGRRF1Q99675 332 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 CLPBQ9H078 707 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 SAP130Q9H0E3 1048 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 INTS2Q9H0H0 1204 aaKnown RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 KRT82Q9NSB4 513 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 IPO11Q9UI26 975 aaKnown RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 SARDHQ9UL12 918 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 OSGIN2Q9Y236 505 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 PCDHGA3Q9Y5H0 932 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 PCDHA5Q9Y5H7 936 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 MEGF8Q7Z7M0 2845 aa7.1□□□□□ -1.27
CHD3-213ENST00000571249 MDC1Q14676 2089 aaKnown RBP7.1□□□□□ -1.27
CHD3-213ENST00000571249 SPTY2D1-AS1A0A0U1RR47 76 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 GOLGA8IPA6NC78 632 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 GOLGA8JA6NMD2 632 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 A6NNZ2 444 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 F13A1P00488 732 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 TNNC2P02585 160 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ASLP04424 464 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 ANXA6P08133 673 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 FAM163BP0C2L3 166 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 RALAP11233 206 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 VAV1P15498 845 aa7.09□□□□□ -1.27
CHD3-213ENST00000571249 HNRNPA2B1P22626 353 aaKnown RBP7.09□□□□□ -1.27
CHD3-213ENST00000571249 HTR1EP28566 365 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms