RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 SLC6A3Q01959 620 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 CDKN3Q16667 212 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 RETSATQ6NUM9 610 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 TRIM65Q6PJ69 517 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 LINGO4Q6UY18 593 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 RBM44Q6ZP01 1051 aaKnown RBP19.38■□□□□ 0.69
SCARF1-204ENST00000570902 DPY19L3Q6ZPD9 716 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 ZDHHC17Q8IUH5 632 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 PASD1Q8IV76 773 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 ZNF397Q8NF99 534 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-204ENST00000570902 SLC46A1Q96NT5 459 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 CEP44Q9C0F1 390 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 TNKS2Q9H2K2 1166 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 PIGVQ9NUD9 493 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 SALL4Q9UJQ4 1053 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 STAP1Q9ULZ2 295 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 PCDHGA8Q9Y5G5 932 aa19.38■□□□□ 0.69
SCARF1-204ENST00000570902 A0A0D9SEW6 157 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 CPED1A4D0V7 1026 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 DRGXA6NNA5 263 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 BECN2A8MW95 431 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 FPGTO14772 594 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 AQP9O43315 295 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 AP1G1O43747 822 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 TCEA3O75764 348 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 ADCY5O95622 1261 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 FGFR1OPO95684 399 aaKnown RBP19.37■□□□□ 0.69
SCARF1-204ENST00000570902 OR1E1P30953 314 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 CXCR3P49682 368 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 SLC20A2Q08357 652 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 SGCGQ13326 291 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 LY6DQ14210 128 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 NR0B2Q15466 257 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 ARHGAP44Q17R89 818 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 SMYD5Q6GMV2 418 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 ZNF783Q6ZMS7 281 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 EFL1Q7Z2Z2 1120 aaKnown RBP19.37■□□□□ 0.69
SCARF1-204ENST00000570902 ZNF683Q8IZ20 524 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 PCDH20Q8N6Y1 951 aaKnown RBP19.37■□□□□ 0.69
SCARF1-204ENST00000570902 C1orf74Q96LT6 269 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 LENG8Q96PV6 779 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-204ENST00000570902 IL12RB2Q99665 862 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 CAAP1Q9H8G2 361 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 FADS3Q9Y5Q0 445 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 WASF2Q9Y6W5 498 aa19.37■□□□□ 0.69
SCARF1-204ENST00000570902 EME2A4GXA9 379 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-204ENST00000570902 RNF103O00237 685 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 TPP1O14773 563 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 F9P00740 461 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 ERBB2P04626 1255 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 JUNDP17535 347 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 L1CAMP32004 1257 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 MLLT3P42568 568 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-204ENST00000570902 RPIAP49247 311 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 SERPINH1P50454 418 aaKnown RBP19.36■□□□□ 0.69
SCARF1-204ENST00000570902 SKOR1P84550 965 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 PTK2Q05397 1052 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 PAK1Q13153 545 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 PDE1CQ14123 709 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-204ENST00000570902 FGL2Q14314 439 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 GUSBP11Q6P575 273 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 TFAP2DQ7Z6R9 452 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 ARL14Q8N4G2 192 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 C1orf131Q8NDD1 294 aaKnown RBP19.36■□□□□ 0.69
SCARF1-204ENST00000570902 WDR48Q8TAF3 677 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 BTN2A2Q8WVV5 523 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 SHC3Q92529 594 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 GLMNQ92990 594 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 PGAP3Q96FM1 320 aaPredicted RBP19.36■□□□□ 0.69
SCARF1-204ENST00000570902 MED8Q96G25 268 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 ATXN7L3BQ96GX2 97 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 NPY6RQ99463 290 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 HEPHQ9BQS7 1158 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 SEMA4CQ9C0C4 833 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCARF1-204ENST00000570902 APEX2Q9UBZ4 518 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 ENTPD2Q9Y5L3 495 aa19.36■□□□□ 0.69
SCARF1-204ENST00000570902 COL6A6A6NMZ7 2263 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 ILVBLA1L0T0 632 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 K7ENP7 123 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 RAD51BO15315 384 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 ENDOD1O94919 500 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 KRT9P35527 623 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 ANP32AP39687 249 aaKnown RBP19.35■□□□□ 0.69
SCARF1-204ENST00000570902 STX17P56962 302 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 DEFB133Q30KQ1 61 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 OTUD1Q5VV17 481 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-204ENST00000570902 GJB7Q6PEY0 223 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 INO80CQ6PI98 192 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-204ENST00000570902 LMX1AQ8TE12 382 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 CRACR2AQ9BSW2 395 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 SPON2Q9BUD6 331 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 CLMPQ9H6B4 373 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 ANLNQ9NQW6 1124 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 MPP6Q9NZW5 540 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 SPASTQ9UBP0 616 aa19.35■□□□□ 0.69
SCARF1-204ENST00000570902 IGLV3-10A0A075B6K4 115 aa19.34■□□□□ 0.69
SCARF1-204ENST00000570902 TSPAN6O43657 245 aa19.34■□□□□ 0.69
SCARF1-204ENST00000570902 ZNF821O75541 412 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-204ENST00000570902 BMP6P22004 513 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms