RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 GFM1Q96RP9 751 aaKnown RBP7.36□□□□□ -1.23
SMG6-205ENST00000570659 DUSP23Q9BVJ7 150 aa7.36□□□□□ -1.23
SMG6-205ENST00000570659 LRRN3Q9H3W5 708 aa7.36□□□□□ -1.23
SMG6-205ENST00000570659 RDH14Q9HBH5 336 aa7.36□□□□□ -1.23
SMG6-205ENST00000570659 LRRC4Q9HBW1 653 aa7.36□□□□□ -1.23
SMG6-205ENST00000570659 OLA1Q9NTK5 396 aaKnown RBP7.36□□□□□ -1.23
SMG6-205ENST00000570659 TMEM9Q9P0T7 183 aa7.36□□□□□ -1.23
SMG6-205ENST00000570659 APOBEC3BQ9UH17 382 aaKnown RBP7.36□□□□□ -1.23
SMG6-205ENST00000570659 TP53TG5Q9Y2B4 290 aa7.36□□□□□ -1.23
SMG6-205ENST00000570659 MRPS18BQ9Y676 258 aaKnown RBP7.36□□□□□ -1.23
SMG6-205ENST00000570659 RNF215Q9Y6U7 377 aa7.36□□□□□ -1.23
SMG6-205ENST00000570659 ARHGEF17Q96PE2 2063 aaPredicted RBP7.36□□□□□ -1.23
SMG6-205ENST00000570659 CHD5Q8TDI0 1954 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 A0A0D9SEW6 157 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 NEMP2A6NFY4 417 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 PRR19A6NJB7 356 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 TPP1O14773 563 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 B4GAT1O43505 415 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 LEFTY1O75610 366 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 CD160O95971 181 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 BMP15O95972 392 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 JMJD7P0C870 316 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 FGF3P11487 239 aaPredicted RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 P4HA1P13674 534 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 TFE3P19532 575 aaPredicted RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 F8A1P23610 371 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 BRD2P25440 801 aaKnown RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 ITGB7P26010 798 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 TNFRSF8P28908 595 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 AP3M2P53677 418 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 ZNF445P59923 1031 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 BST2Q10589 180 aaKnown RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 ALG11Q2TAA5 492 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 KMT5BQ4FZB7 885 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 C1QL3Q5VWW1 255 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 RNF219Q5W0B1 726 aaPredicted RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 ERN2Q76MJ5 926 aaKnown RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 TIPARPQ7Z3E1 657 aaKnown RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 BRAPQ7Z569 592 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 TICAM1Q8IUC6 712 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 ZNF683Q8IZ20 524 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 OR6K2Q8NGY2 324 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 CCL4L1Q8NHW4 92 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 C9orf43Q8TAL5 461 aaPredicted RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 PTCD2Q8WV60 388 aaKnown RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 CENPTQ96BT3 561 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 GRAMD1AQ96CP6 724 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 IPO9Q96P70 1041 aaKnown RBP7.35□□□□□ -1.23
SMG6-205ENST00000570659 IL12RB2Q99665 862 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 NUDT22Q9BRQ3 303 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 C1QTNF2Q9BXJ5 285 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 ADNPQ9H2P0 1102 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 CNGB3Q9NQW8 809 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 FOXD4L1Q9NU39 408 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 VPS51Q9UID3 782 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 KCND3Q9UK17 655 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 MAPK8IP1Q9UQF2 711 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 HS3ST3A1Q9Y663 406 aa7.35□□□□□ -1.23
SMG6-205ENST00000570659 LOC101059948A0A1B0GTJ6 334 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 FAM170AA1A519 330 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 KCNU1A8MYU2 1149 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.34□□□□□ -1.23
SMG6-205ENST00000570659 IKBKBO14920 756 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 AGFG2O95081 481 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 PRR29P0C7W0 189 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 ADRB3P13945 408 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 CD19P15391 556 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 MPSTP25325 297 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 CSF2RBP32927 897 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 UGT1A3P35503 534 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 NUDT1P36639 197 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 DPYDQ12882 1025 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 LRMPQ12912 555 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 MRPL49Q13405 166 aaKnown RBP7.34□□□□□ -1.23
SMG6-205ENST00000570659 HS1BP3Q53T59 392 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 EFHC2Q5JST6 749 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 FOXR2Q6PJQ5 311 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 STXBP4Q6ZWJ1 553 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 SPRED1Q7Z699 444 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 DSG4Q86SJ6 1040 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 VPS36Q86VN1 386 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 CCNJLQ8IV13 435 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 UNC45BQ8IWX7 931 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 SIX6OS1Q8N1H7 587 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 SCML4Q8N228 414 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 PELI3Q8N2H9 469 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 OR7D4Q8NG98 312 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 SPATA20Q8TB22 786 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 PDCD6IPQ8WUM4 868 aaKnown RBP7.34□□□□□ -1.23
SMG6-205ENST00000570659 ERCC4Q92889 916 aaPredicted RBP7.34□□□□□ -1.23
SMG6-205ENST00000570659 SPRY4Q9C004 299 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 ACP6Q9NPH0 428 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 OCIAD1Q9NX40 245 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 ANAPC2Q9UJX6 822 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 HS3ST2Q9Y278 367 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 COQ6Q9Y2Z9 468 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 ST14Q9Y5Y6 855 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 B3GALT1Q9Y5Z6 326 aa7.34□□□□□ -1.23
SMG6-205ENST00000570659 PCSK5Q92824 1860 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms