RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GNA12Q03113 381 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 CCDC15Q0P6D6 951 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 CARD16Q5EG05 197 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 LRRC73Q5JTD7 316 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 KLHDC7AQ5VTJ3 777 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 RWDD4Q6NW29 188 aaKnown RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 NEK5Q6P3R8 708 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 PARS2Q7L3T8 475 aaKnown RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 DCBLD1Q8N8Z6 715 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 OR4C6Q8NH72 309 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 SLC20A1Q8WUM9 679 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 FGF11Q92914 225 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 PGAP3Q96FM1 320 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 BMFQ96LC9 184 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 APOLD1Q96LR9 279 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 C1orf74Q96LT6 269 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 FCRL3Q96P31 734 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 HEPHQ9BQS7 1158 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 HDAC8Q9BY41 377 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 SLC17A9Q9BYT1 436 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 ZDHHC6Q9H6R6 413 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 METTL5Q9NRN9 209 aaKnown RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 SAMSN1Q9NSI8 373 aaKnown RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 HECAQ9UBI9 543 aaPredicted RBP8.78□□□□□ -1
CTDNEP1-203ENST00000570385 DNAI1Q9UI46 699 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 GGT7Q9UJ14 662 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 ITM2BQ9Y287 266 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 PAXBP1Q9Y5B6 917 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 FADS3Q9Y5Q0 445 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 DOCK4Q8N1I0 1966 aa8.78□□□□□ -1
CTDNEP1-203ENST00000570385 KIF26BQ2KJY2 2108 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 HELZ2Q9BYK8 2649 aaKnown RBP8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 IGLV3-10A0A075B6K4 115 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 ILVBLA1L0T0 632 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 CPED1A4D0V7 1026 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 IGLON5A6NGN9 336 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 A6NNZ2 444 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM72CH0Y354 149 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 K7ESM1 405 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 KRIT1O00522 736 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 NEMP1O14524 444 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 OPA1O60313 960 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 CD160O95971 181 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 ADRB3P13945 408 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 UCHL3P15374 230 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 L1CAMP32004 1257 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 KLK7P49862 253 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 NOMO3P69849 1222 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 E2F1Q01094 437 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 FZD2Q14332 565 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 CDKN3Q16667 212 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 C15orf59Q2T9L4 293 aaPredicted RBP8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 TMEM259Q4ZIN3 620 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 TPRG1LQ5T0D9 272 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM72AQ5TYM5 149 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM72DQ6L9T8 149 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 RETSATQ6NUM9 610 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 CRTC1Q6UUV9 634 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 ABI3BPQ7Z7G0 1075 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM72BQ86X60 149 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM114A1Q8IWE2 563 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 SLC30A5Q8TAD4 765 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 GPT2Q8TD30 523 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 RFFLQ8WZ73 363 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 BAP1Q92560 729 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 PPP1R16AQ96I34 528 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 FEM1CQ96JP0 617 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 HAPLN3Q96S86 360 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZYG11BQ9C0D3 744 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 ABCG4Q9H172 646 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 PRORYQ9H606 182 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 TAB2Q9NYJ8 693 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF212Q9UDV6 495 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 IPO11Q9UI26 975 aaKnown RBP8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 KLF15Q9UIH9 416 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 TMEM59LQ9UK28 342 aa8.77□□□□□ -1.01
CTDNEP1-203ENST00000570385 SMG1Q96Q15 3661 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 LY6G6EA0A0G2JKS1 128 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 C16orf96A6NNT2 1141 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 F8VZ95 297 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SCAMP1O15126 338 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 CASC3O15234 703 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SPINT1O43278 529 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 USP12O75317 370 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 CSO75390 466 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 GFPT2O94808 682 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 UGT2B4P06133 528 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ALPPL2P10696 532 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 CKMT1AP12532 417 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ITIH2P19823 946 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ITGB7P26010 798 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ACTN2P35609 894 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 ABL2P42684 1182 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 RPS21P63220 83 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 CXADRP78310 365 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 GABREP78334 506 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 TLE3Q04726 772 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SLC20A2Q08357 652 aa8.76□□□□□ -1.01
CTDNEP1-203ENST00000570385 SGCGQ13326 291 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms