RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CRADDP78560 199 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PDE1BQ01064 536 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 OCRLQ01968 901 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 BST1Q10588 318 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 STX3Q13277 289 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 MPP3Q13368 585 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 BMPR2Q13873 1038 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PDE1CQ14123 709 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ZKSCAN8Q15776 578 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 DDR2Q16832 855 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ANO4Q32M45 955 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CCDC153Q494R4 210 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 FAM133BQ5BKY9 247 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 MS4A13Q5J8X5 152 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CERCAMQ5T4B2 595 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RASIP1Q5U651 963 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PIK3R6Q5UE93 754 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 FBXW10Q5XX13 1052 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PDPK2PQ6A1A2 396 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 SLC8B1Q6J4K2 584 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CYB5D1Q6P9G0 228 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 KLHDC10Q6PID8 442 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 FBXO46Q6PJ61 603 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 KDELC1Q6UW63 502 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RSPO2Q6UXX9 243 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ANKS3Q6ZW76 656 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 NLRP9Q7RTR0 991 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 OTOP3Q7RTS5 596 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ANKRD33Q7Z3H0 272 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CLEC14AQ86T13 490 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CNTN4Q8IWV2 1026 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 SUGP1Q8IWZ8 645 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RNF168Q8IYW5 571 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 UNC5BQ8IZJ1 945 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ABI1Q8IZP0 508 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ATPAF2Q8N5M1 289 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ATP6V0D2Q8N8Y2 350 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 DNAAF3Q8N9W5 541 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ATAD1Q8NBU5 361 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 SCG3Q8WXD2 468 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 OVCA2Q8WZ82 227 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ATP2A3Q93084 1043 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CELF6Q96J87 481 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF333Q96JL9 665 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF599Q96NL3 588 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TOX2Q96NM4 488 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 DEFB118Q96PH6 123 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RBBP8Q99708 897 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TBL1YQ9BQ87 522 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TRIM56Q9BRZ2 755 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TTPALQ9BTX7 342 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 CEP41Q9BYV8 373 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 SLC13A1Q9BZW2 595 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ZYG11BQ9C0D3 744 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 IQCGQ9H095 443 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 MYLK2Q9H1R3 596 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 LRMDAQ9H2I8 198 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 C12orf65Q9H3J6 166 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TLR8Q9NR97 1041 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 VPS45Q9NRW7 570 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 THAP1Q9NVV9 213 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RBM22Q9NW64 420 aaKnown RBP eCLIP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ABI2Q9NYB9 513 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 MARCH2Q9P0N8 246 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 GMIPQ9P107 970 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ZFATQ9P243 1243 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF212Q9UDV6 495 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 IPO11Q9UI26 975 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 LNPEPQ9UIQ6 1025 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 EMCNQ9ULC0 261 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 LRFN2Q9ULH4 789 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 MAFFQ9ULX9 164 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RPL26L1Q9UNX3 145 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 SORCS3Q9UPU3 1222 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ANKRD6Q9Y2G4 727 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PRG3Q9Y2Y8 225 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 HBS1LQ9Y450 684 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 NLRC5Q86WI3 1866 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 LOC285095A0A1B0GVY8 99 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MTMR11A4FU01 709 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 SLC38A8A6NNN8 435 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TMEM229AB2RXF0 380 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 DFFAO00273 331 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MSI1O43347 362 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 USP12O75317 370 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 ADH1BP00325 375 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PROCP04070 461 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 APOA4P06727 396 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TPH1P17752 444 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 CES1P23141 567 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 NMBRP28336 390 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 TYK2P29597 1187 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 PBX3P40426 434 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 ARCN1P48444 511 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 MAPKAPK2P49137 400 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 HARS2P49590 506 aaKnown RBP5.46□□□□□ -1.54
SF3B3-213ENST00000569687 GPR15P49685 360 aa5.46□□□□□ -1.54
SF3B3-213ENST00000569687 SERPINB8P50452 374 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 312.9 ms